Gene : Araha.3774s0002 A. halleri v1.1

Defline:  (1 of 1) 3.4.24.75 - Lysostaphin / Glycyl-glycine endopeptidase Genomic Order:  2
Name:  ? Araha.3774s0002 Secondary Identifier:  ? PAC:28857362

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3774s0002 0.5kb upstream 0.5kb upstream 1301 true Scaffold3774: 8638-9938 Arabidopsis halleri
Araha.3774s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3774: 9439-9938 Arabidopsis halleri
Araha.3774s0002 0.5kb downstream 0.5kb downstream 1301 true Scaffold3774: 8138-9438 Arabidopsis halleri
Araha.3774s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3774: 8138-8637 Arabidopsis halleri
Araha.3774s0002 1.0kb upstream 1.0kb upstream 1801 true Scaffold3774: 8638-10438 Arabidopsis halleri
Araha.3774s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3774: 9439-10438 Arabidopsis halleri
Araha.3774s0002 1.0kb downstream 1.0kb downstream 1801 true Scaffold3774: 7638-9438 Arabidopsis halleri
Araha.3774s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3774: 7638-8637 Arabidopsis halleri
Araha.3774s0002 2.0kb upstream 2.0kb upstream 2801 true Scaffold3774: 8638-11438 Arabidopsis halleri
Araha.3774s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3774: 9439-11438 Arabidopsis halleri
Araha.3774s0002 2.0kb downstream 2.0kb downstream 2801 true Scaffold3774: 6638-9438 Arabidopsis halleri
Araha.3774s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3774: 6638-8637 Arabidopsis halleri
Araha.3774s0002 5.0kb upstream 5.0kb upstream 5801 true Scaffold3774: 8638-14438 Arabidopsis halleri
Araha.3774s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3774: 9439-14438 Arabidopsis halleri
Araha.3774s0002 5.0kb downstream 5.0kb downstream 5801 true Scaffold3774: 3638-9438 Arabidopsis halleri
Araha.3774s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3774: 3638-8637 Arabidopsis halleri
Araha.3774s0002 10.0kb upstream 10.0kb upstream 10801 true Scaffold3774: 8638-19438 Arabidopsis halleri
Araha.3774s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3774: 9439-19438 Arabidopsis halleri
Araha.3774s0002 10.0kb downstream 10.0kb downstream 9438 true Scaffold3774: 1-9438 Arabidopsis halleri
Araha.3774s0002 10.0kb downstream 10.0kb downstream 8637 false Scaffold3774: 1-8637 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487247 5273 Angiosperm Singleton cluster - no MSA
122320979 5261 Brassicaceae Singleton cluster - no MSA
123762574 5264 Brassicales-Malvales Singleton cluster - no MSA
124261209 5266 SBM Singleton cluster - no MSA
124117828 5268 Malvidae Singleton cluster - no MSA
123847218 5270 Rosid Singleton cluster - no MSA
123433498 5271 Pentapetalae Singleton cluster - no MSA
122469118 5272 Eudicot Singleton cluster - no MSA
120760636 5274 Embryophyte Singleton cluster - no MSA
122803079 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain