Gene : Araha.3867s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR34682:SF2 - DNA BINDING PROTEIN Genomic Order:  3
Name:  ? Araha.3867s0003 Secondary Identifier:  ? PAC:28859989

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3867s0003 0.5kb upstream 0.5kb upstream 2953 true Scaffold3867: 13163-16115 Arabidopsis halleri
Araha.3867s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3867: 13163-13662 Arabidopsis halleri
Araha.3867s0003 0.5kb downstream 0.5kb downstream 2953 true Scaffold3867: 13663-16615 Arabidopsis halleri
Araha.3867s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3867: 16116-16615 Arabidopsis halleri
Araha.3867s0003 1.0kb upstream 1.0kb upstream 3453 true Scaffold3867: 12663-16115 Arabidopsis halleri
Araha.3867s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3867: 12663-13662 Arabidopsis halleri
Araha.3867s0003 1.0kb downstream 1.0kb downstream 3453 true Scaffold3867: 13663-17115 Arabidopsis halleri
Araha.3867s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3867: 16116-17115 Arabidopsis halleri
Araha.3867s0003 2.0kb upstream 2.0kb upstream 4453 true Scaffold3867: 11663-16115 Arabidopsis halleri
Araha.3867s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3867: 11663-13662 Arabidopsis halleri
Araha.3867s0003 2.0kb downstream 2.0kb downstream 4453 true Scaffold3867: 13663-18115 Arabidopsis halleri
Araha.3867s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3867: 16116-18115 Arabidopsis halleri
Araha.3867s0003 5.0kb upstream 5.0kb upstream 7453 true Scaffold3867: 8663-16115 Arabidopsis halleri
Araha.3867s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3867: 8663-13662 Arabidopsis halleri
Araha.3867s0003 5.0kb downstream 5.0kb downstream 4811 true Scaffold3867: 13663-18473 Arabidopsis halleri
Araha.3867s0003 5.0kb downstream 5.0kb downstream 2358 false Scaffold3867: 16116-18473 Arabidopsis halleri
Araha.3867s0003 10.0kb upstream 10.0kb upstream 12453 true Scaffold3867: 3663-16115 Arabidopsis halleri
Araha.3867s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3867: 3663-13662 Arabidopsis halleri
Araha.3867s0003 10.0kb downstream 10.0kb downstream 4811 true Scaffold3867: 13663-18473 Arabidopsis halleri
Araha.3867s0003 10.0kb downstream 10.0kb downstream 2358 false Scaffold3867: 16116-18473 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361503 5261 Brassicaceae View MSA
123833681 5264 Brassicales-Malvales View MSA
124321888 5266 SBM View MSA
124245786 5268 Malvidae View MSA
124060982 5270 Rosid View MSA
123743810 5271 Pentapetalae View MSA
122794319 5272 Eudicot View MSA
122045641 5273 Angiosperm View MSA
121350221 5274 Embryophyte View MSA
123381629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain