Gene : Araha.3979s0001 A. halleri v1.1

Defline:  (1 of 1) PTHR12081:SF51 - TRANSCRIPTION FACTOR E2FC Genomic Order:  1
Name:  ? Araha.3979s0001 Secondary Identifier:  ? PAC:28861035

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3979s0001 0.5kb upstream 0.5kb upstream 3435 true Scaffold3979: 515-3949 Arabidopsis halleri
Araha.3979s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3979: 3450-3949 Arabidopsis halleri
Araha.3979s0001 0.5kb downstream 0.5kb downstream 3435 true Scaffold3979: 15-3449 Arabidopsis halleri
Araha.3979s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3979: 15-514 Arabidopsis halleri
Araha.3979s0001 1.0kb upstream 1.0kb upstream 3935 true Scaffold3979: 515-4449 Arabidopsis halleri
Araha.3979s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3979: 3450-4449 Arabidopsis halleri
Araha.3979s0001 1.0kb downstream 1.0kb downstream 3449 true Scaffold3979: 1-3449 Arabidopsis halleri
Araha.3979s0001 1.0kb downstream 1.0kb downstream 514 false Scaffold3979: 1-514 Arabidopsis halleri
Araha.3979s0001 2.0kb upstream 2.0kb upstream 4935 true Scaffold3979: 515-5449 Arabidopsis halleri
Araha.3979s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3979: 3450-5449 Arabidopsis halleri
Araha.3979s0001 2.0kb downstream 2.0kb downstream 3449 true Scaffold3979: 1-3449 Arabidopsis halleri
Araha.3979s0001 2.0kb downstream 2.0kb downstream 514 false Scaffold3979: 1-514 Arabidopsis halleri
Araha.3979s0001 5.0kb upstream 5.0kb upstream 7935 true Scaffold3979: 515-8449 Arabidopsis halleri
Araha.3979s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold3979: 3450-8449 Arabidopsis halleri
Araha.3979s0001 5.0kb downstream 5.0kb downstream 3449 true Scaffold3979: 1-3449 Arabidopsis halleri
Araha.3979s0001 5.0kb downstream 5.0kb downstream 514 false Scaffold3979: 1-514 Arabidopsis halleri
Araha.3979s0001 10.0kb upstream 10.0kb upstream 12935 true Scaffold3979: 515-13449 Arabidopsis halleri
Araha.3979s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold3979: 3450-13449 Arabidopsis halleri
Araha.3979s0001 10.0kb downstream 10.0kb downstream 3449 true Scaffold3979: 1-3449 Arabidopsis halleri
Araha.3979s0001 10.0kb downstream 10.0kb downstream 514 false Scaffold3979: 1-514 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792207 5273 Angiosperm View MSA
122371181 5261 Brassicaceae View MSA
123827990 5264 Brassicales-Malvales View MSA
124337351 5266 SBM View MSA
124241947 5268 Malvidae View MSA
124061286 5270 Rosid View MSA
123738589 5271 Pentapetalae View MSA
122796961 5272 Eudicot View MSA
121063453 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain