Gene : Araha.3931s0005 A. halleri v1.1

Defline:  (1 of 2) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  5
Name:  ? Araha.3931s0005 Secondary Identifier:  ? PAC:28838517

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.3931s0005 0.5kb upstream 0.5kb upstream 2402 true Scaffold3931: 14066-16467 Arabidopsis halleri
Araha.3931s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3931: 14066-14565 Arabidopsis halleri
Araha.3931s0005 0.5kb downstream 0.5kb downstream 2402 true Scaffold3931: 14566-16967 Arabidopsis halleri
Araha.3931s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3931: 16468-16967 Arabidopsis halleri
Araha.3931s0005 1.0kb upstream 1.0kb upstream 2902 true Scaffold3931: 13566-16467 Arabidopsis halleri
Araha.3931s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3931: 13566-14565 Arabidopsis halleri
Araha.3931s0005 1.0kb downstream 1.0kb downstream 2902 true Scaffold3931: 14566-17467 Arabidopsis halleri
Araha.3931s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3931: 16468-17467 Arabidopsis halleri
Araha.3931s0005 2.0kb upstream 2.0kb upstream 3902 true Scaffold3931: 12566-16467 Arabidopsis halleri
Araha.3931s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3931: 12566-14565 Arabidopsis halleri
Araha.3931s0005 2.0kb downstream 2.0kb downstream 3902 true Scaffold3931: 14566-18467 Arabidopsis halleri
Araha.3931s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3931: 16468-18467 Arabidopsis halleri
Araha.3931s0005 5.0kb upstream 5.0kb upstream 6902 true Scaffold3931: 9566-16467 Arabidopsis halleri
Araha.3931s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3931: 9566-14565 Arabidopsis halleri
Araha.3931s0005 5.0kb downstream 5.0kb downstream 5686 true Scaffold3931: 14566-20251 Arabidopsis halleri
Araha.3931s0005 5.0kb downstream 5.0kb downstream 3784 false Scaffold3931: 16468-20251 Arabidopsis halleri
Araha.3931s0005 10.0kb upstream 10.0kb upstream 11902 true Scaffold3931: 4566-16467 Arabidopsis halleri
Araha.3931s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3931: 4566-14565 Arabidopsis halleri
Araha.3931s0005 10.0kb downstream 10.0kb downstream 5686 true Scaffold3931: 14566-20251 Arabidopsis halleri
Araha.3931s0005 10.0kb downstream 10.0kb downstream 3784 false Scaffold3931: 16468-20251 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363426 5261 Brassicaceae View MSA
123828950 5264 Brassicales-Malvales View MSA
124346593 5266 SBM View MSA
124248083 5268 Malvidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain