Gene : Araha.4080s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR21668:SF5 - NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN-RELATED Genomic Order:  3
Name:  ? Araha.4080s0003 Secondary Identifier:  ? PAC:28845912

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4080s0003 0.5kb upstream 0.5kb upstream 1608 true Scaffold4080: 19585-21192 Arabidopsis halleri
Araha.4080s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4080: 20693-21192 Arabidopsis halleri
Araha.4080s0003 0.5kb downstream 0.5kb downstream 1608 true Scaffold4080: 19085-20692 Arabidopsis halleri
Araha.4080s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4080: 19085-19584 Arabidopsis halleri
Araha.4080s0003 1.0kb upstream 1.0kb upstream 2108 true Scaffold4080: 19585-21692 Arabidopsis halleri
Araha.4080s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4080: 20693-21692 Arabidopsis halleri
Araha.4080s0003 1.0kb downstream 1.0kb downstream 2108 true Scaffold4080: 18585-20692 Arabidopsis halleri
Araha.4080s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4080: 18585-19584 Arabidopsis halleri
Araha.4080s0003 2.0kb upstream 2.0kb upstream 3108 true Scaffold4080: 19585-22692 Arabidopsis halleri
Araha.4080s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4080: 20693-22692 Arabidopsis halleri
Araha.4080s0003 2.0kb downstream 2.0kb downstream 3108 true Scaffold4080: 17585-20692 Arabidopsis halleri
Araha.4080s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4080: 17585-19584 Arabidopsis halleri
Araha.4080s0003 5.0kb upstream 5.0kb upstream 6108 true Scaffold4080: 19585-25692 Arabidopsis halleri
Araha.4080s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4080: 20693-25692 Arabidopsis halleri
Araha.4080s0003 5.0kb downstream 5.0kb downstream 6108 true Scaffold4080: 14585-20692 Arabidopsis halleri
Araha.4080s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4080: 14585-19584 Arabidopsis halleri
Araha.4080s0003 10.0kb upstream 10.0kb upstream 11108 true Scaffold4080: 19585-30692 Arabidopsis halleri
Araha.4080s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4080: 20693-30692 Arabidopsis halleri
Araha.4080s0003 10.0kb downstream 10.0kb downstream 11108 true Scaffold4080: 9585-20692 Arabidopsis halleri
Araha.4080s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold4080: 9585-19584 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377038 5261 Brassicaceae View MSA
123836382 5264 Brassicales-Malvales View MSA
124341992 5266 SBM View MSA
124243826 5268 Malvidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain