Gene : Araha.4080s0007 A. halleri v1.1
Defline:  (1 of 1) PTHR30372 - LIPID-A-DISACCHARIDE SYNTHASE Genomic Order:  7
Name:  ? Araha.4080s0007 Secondary Identifier:  ? PAC:28845915
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri NAGLIPASYN-PWY Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4080s0007 0.5kb upstream 0.5kb upstream 3585 true Scaffold4080: 35188-38772 Arabidopsis halleri
Araha.4080s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold4080: 38273-38772 Arabidopsis halleri
Araha.4080s0007 0.5kb downstream 0.5kb downstream 3585 true Scaffold4080: 34688-38272 Arabidopsis halleri
Araha.4080s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold4080: 34688-35187 Arabidopsis halleri
Araha.4080s0007 1.0kb upstream 1.0kb upstream 3715 true Scaffold4080: 35188-38902 Arabidopsis halleri
Araha.4080s0007 1.0kb upstream 1.0kb upstream 630 false Scaffold4080: 38273-38902 Arabidopsis halleri
Araha.4080s0007 1.0kb downstream 1.0kb downstream 4085 true Scaffold4080: 34188-38272 Arabidopsis halleri
Araha.4080s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold4080: 34188-35187 Arabidopsis halleri
Araha.4080s0007 2.0kb upstream 2.0kb upstream 3715 true Scaffold4080: 35188-38902 Arabidopsis halleri
Araha.4080s0007 2.0kb upstream 2.0kb upstream 630 false Scaffold4080: 38273-38902 Arabidopsis halleri
Araha.4080s0007 2.0kb downstream 2.0kb downstream 5085 true Scaffold4080: 33188-38272 Arabidopsis halleri
Araha.4080s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold4080: 33188-35187 Arabidopsis halleri
Araha.4080s0007 5.0kb upstream 5.0kb upstream 3715 true Scaffold4080: 35188-38902 Arabidopsis halleri
Araha.4080s0007 5.0kb upstream 5.0kb upstream 630 false Scaffold4080: 38273-38902 Arabidopsis halleri
Araha.4080s0007 5.0kb downstream 5.0kb downstream 8085 true Scaffold4080: 30188-38272 Arabidopsis halleri
Araha.4080s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold4080: 30188-35187 Arabidopsis halleri
Araha.4080s0007 10.0kb upstream 10.0kb upstream 3715 true Scaffold4080: 35188-38902 Arabidopsis halleri
Araha.4080s0007 10.0kb upstream 10.0kb upstream 630 false Scaffold4080: 38273-38902 Arabidopsis halleri
Araha.4080s0007 10.0kb downstream 10.0kb downstream 13085 true Scaffold4080: 25188-38272 Arabidopsis halleri
Araha.4080s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold4080: 25188-35187 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367642 5261 Brassicaceae View MSA
123832263 5264 Brassicales-Malvales View MSA
124341423 5266 SBM View MSA
124243091 5268 Malvidae View MSA
124067392 5270 Rosid View MSA
123747166 5271 Pentapetalae View MSA
122791278 5272 Eudicot View MSA
122042549 5273 Angiosperm View MSA
121345953 5274 Embryophyte View MSA
123380297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain