Gene : Araha.4056s0010 A. halleri v1.1
Defline:  (1 of 4) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  10
Name:  ? Araha.4056s0010 Secondary Identifier:  ? PAC:28854625
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYOXYLATE-BYPASS Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-561 Arabidopsis halleri pathologic  
Ahalleri PWY-5690 Arabidopsis halleri pathologic  
Ahalleri PWY-6549 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4056s0010 0.5kb upstream 0.5kb upstream 3507 true Scaffold4056: 39728-43234 Arabidopsis halleri
Araha.4056s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold4056: 39728-40227 Arabidopsis halleri
Araha.4056s0010 0.5kb downstream 0.5kb downstream 3507 true Scaffold4056: 40228-43734 Arabidopsis halleri
Araha.4056s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold4056: 43235-43734 Arabidopsis halleri
Araha.4056s0010 1.0kb upstream 1.0kb upstream 4007 true Scaffold4056: 39228-43234 Arabidopsis halleri
Araha.4056s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold4056: 39228-40227 Arabidopsis halleri
Araha.4056s0010 1.0kb downstream 1.0kb downstream 4007 true Scaffold4056: 40228-44234 Arabidopsis halleri
Araha.4056s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold4056: 43235-44234 Arabidopsis halleri
Araha.4056s0010 2.0kb upstream 2.0kb upstream 5007 true Scaffold4056: 38228-43234 Arabidopsis halleri
Araha.4056s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold4056: 38228-40227 Arabidopsis halleri
Araha.4056s0010 2.0kb downstream 2.0kb downstream 5007 true Scaffold4056: 40228-45234 Arabidopsis halleri
Araha.4056s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold4056: 43235-45234 Arabidopsis halleri
Araha.4056s0010 5.0kb upstream 5.0kb upstream 8007 true Scaffold4056: 35228-43234 Arabidopsis halleri
Araha.4056s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold4056: 35228-40227 Arabidopsis halleri
Araha.4056s0010 5.0kb downstream 5.0kb downstream 8007 true Scaffold4056: 40228-48234 Arabidopsis halleri
Araha.4056s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold4056: 43235-48234 Arabidopsis halleri
Araha.4056s0010 10.0kb upstream 10.0kb upstream 13007 true Scaffold4056: 30228-43234 Arabidopsis halleri
Araha.4056s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold4056: 30228-40227 Arabidopsis halleri
Araha.4056s0010 10.0kb downstream 10.0kb downstream 13007 true Scaffold4056: 40228-53234 Arabidopsis halleri
Araha.4056s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold4056: 43235-53234 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379222 5261 Brassicaceae View MSA
123836656 5264 Brassicales-Malvales View MSA
124345629 5266 SBM View MSA
124251480 5268 Malvidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain