Gene : Araha.4260s0002 A. halleri v1.1

Defline:  (1 of 1) PTHR31444:SF8 - PROTEIN IRREGULAR XYLEM 15-RELATED Genomic Order:  2
Name:  ? Araha.4260s0002 Secondary Identifier:  ? PAC:28839108

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4260s0002 0.5kb upstream 0.5kb upstream 2580 true Scaffold4260: 12376-14955 Arabidopsis halleri
Araha.4260s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4260: 12376-12875 Arabidopsis halleri
Araha.4260s0002 0.5kb downstream 0.5kb downstream 2580 true Scaffold4260: 12876-15455 Arabidopsis halleri
Araha.4260s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4260: 14956-15455 Arabidopsis halleri
Araha.4260s0002 1.0kb upstream 1.0kb upstream 3080 true Scaffold4260: 11876-14955 Arabidopsis halleri
Araha.4260s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4260: 11876-12875 Arabidopsis halleri
Araha.4260s0002 1.0kb downstream 1.0kb downstream 3080 true Scaffold4260: 12876-15955 Arabidopsis halleri
Araha.4260s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4260: 14956-15955 Arabidopsis halleri
Araha.4260s0002 2.0kb upstream 2.0kb upstream 4080 true Scaffold4260: 10876-14955 Arabidopsis halleri
Araha.4260s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4260: 10876-12875 Arabidopsis halleri
Araha.4260s0002 2.0kb downstream 2.0kb downstream 4080 true Scaffold4260: 12876-16955 Arabidopsis halleri
Araha.4260s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4260: 14956-16955 Arabidopsis halleri
Araha.4260s0002 5.0kb upstream 5.0kb upstream 7080 true Scaffold4260: 7876-14955 Arabidopsis halleri
Araha.4260s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4260: 7876-12875 Arabidopsis halleri
Araha.4260s0002 5.0kb downstream 5.0kb downstream 7080 true Scaffold4260: 12876-19955 Arabidopsis halleri
Araha.4260s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4260: 14956-19955 Arabidopsis halleri
Araha.4260s0002 10.0kb upstream 10.0kb upstream 12080 true Scaffold4260: 2876-14955 Arabidopsis halleri
Araha.4260s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold4260: 2876-12875 Arabidopsis halleri
Araha.4260s0002 10.0kb downstream 10.0kb downstream 12080 true Scaffold4260: 12876-24955 Arabidopsis halleri
Araha.4260s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4260: 14956-24955 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121483549 5273 Angiosperm Singleton cluster - no MSA
122317264 5261 Brassicaceae Singleton cluster - no MSA
123758864 5264 Brassicales-Malvales Singleton cluster - no MSA
124257499 5266 SBM Singleton cluster - no MSA
124114122 5268 Malvidae Singleton cluster - no MSA
123843514 5270 Rosid Singleton cluster - no MSA
123429797 5271 Pentapetalae Singleton cluster - no MSA
122465418 5272 Eudicot Singleton cluster - no MSA
120756944 5274 Embryophyte Singleton cluster - no MSA
122799404 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain