Gene : Araha.4229s0012 A. halleri v1.1
Defline:  (1 of 2) PTHR10336:SF105 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 1-RELATED Genomic Order:  12
Name:  ? Araha.4229s0012 Secondary Identifier:  ? PAC:28841292
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LIPASYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6351 Arabidopsis halleri pathologic  
Ahalleri PWY-6367 Arabidopsis halleri pathologic  
Ahalleri PWY-7039 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4229s0012 0.5kb upstream 0.5kb upstream 2839 true Scaffold4229: 41366-44204 Arabidopsis halleri
Araha.4229s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold4229: 41366-41865 Arabidopsis halleri
Araha.4229s0012 0.5kb downstream 0.5kb downstream 2839 true Scaffold4229: 41866-44704 Arabidopsis halleri
Araha.4229s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold4229: 44205-44704 Arabidopsis halleri
Araha.4229s0012 1.0kb upstream 1.0kb upstream 3339 true Scaffold4229: 40866-44204 Arabidopsis halleri
Araha.4229s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold4229: 40866-41865 Arabidopsis halleri
Araha.4229s0012 1.0kb downstream 1.0kb downstream 3339 true Scaffold4229: 41866-45204 Arabidopsis halleri
Araha.4229s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold4229: 44205-45204 Arabidopsis halleri
Araha.4229s0012 2.0kb upstream 2.0kb upstream 4339 true Scaffold4229: 39866-44204 Arabidopsis halleri
Araha.4229s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold4229: 39866-41865 Arabidopsis halleri
Araha.4229s0012 2.0kb downstream 2.0kb downstream 4339 true Scaffold4229: 41866-46204 Arabidopsis halleri
Araha.4229s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold4229: 44205-46204 Arabidopsis halleri
Araha.4229s0012 5.0kb upstream 5.0kb upstream 7339 true Scaffold4229: 36866-44204 Arabidopsis halleri
Araha.4229s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold4229: 36866-41865 Arabidopsis halleri
Araha.4229s0012 5.0kb downstream 5.0kb downstream 7339 true Scaffold4229: 41866-49204 Arabidopsis halleri
Araha.4229s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold4229: 44205-49204 Arabidopsis halleri
Araha.4229s0012 10.0kb upstream 10.0kb upstream 12339 true Scaffold4229: 31866-44204 Arabidopsis halleri
Araha.4229s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold4229: 31866-41865 Arabidopsis halleri
Araha.4229s0012 10.0kb downstream 10.0kb downstream 12339 true Scaffold4229: 41866-54204 Arabidopsis halleri
Araha.4229s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold4229: 44205-54204 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361806 5261 Brassicaceae View MSA
123798250 5264 Brassicales-Malvales View MSA
124295917 5266 SBM View MSA
124148223 5268 Malvidae View MSA
123874264 5270 Rosid View MSA
123458265 5271 Pentapetalae View MSA
122796639 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain