Gene : Araha.4197s0012 A. halleri v1.1

Defline:  (1 of 39) PF04535 - Domain of unknown function (DUF588) (DUF588) Genomic Order:  12
Name:  ? Araha.4197s0012 Secondary Identifier:  ? PAC:28839672

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4197s0012 0.5kb upstream 0.5kb upstream 1742 true Scaffold4197: 26102-27843 Arabidopsis halleri
Araha.4197s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold4197: 27344-27843 Arabidopsis halleri
Araha.4197s0012 0.5kb downstream 0.5kb downstream 1742 true Scaffold4197: 25602-27343 Arabidopsis halleri
Araha.4197s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold4197: 25602-26101 Arabidopsis halleri
Araha.4197s0012 1.0kb upstream 1.0kb upstream 2242 true Scaffold4197: 26102-28343 Arabidopsis halleri
Araha.4197s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold4197: 27344-28343 Arabidopsis halleri
Araha.4197s0012 1.0kb downstream 1.0kb downstream 2242 true Scaffold4197: 25102-27343 Arabidopsis halleri
Araha.4197s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold4197: 25102-26101 Arabidopsis halleri
Araha.4197s0012 2.0kb upstream 2.0kb upstream 3242 true Scaffold4197: 26102-29343 Arabidopsis halleri
Araha.4197s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold4197: 27344-29343 Arabidopsis halleri
Araha.4197s0012 2.0kb downstream 2.0kb downstream 3242 true Scaffold4197: 24102-27343 Arabidopsis halleri
Araha.4197s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold4197: 24102-26101 Arabidopsis halleri
Araha.4197s0012 5.0kb upstream 5.0kb upstream 6242 true Scaffold4197: 26102-32343 Arabidopsis halleri
Araha.4197s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold4197: 27344-32343 Arabidopsis halleri
Araha.4197s0012 5.0kb downstream 5.0kb downstream 6242 true Scaffold4197: 21102-27343 Arabidopsis halleri
Araha.4197s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold4197: 21102-26101 Arabidopsis halleri
Araha.4197s0012 10.0kb upstream 10.0kb upstream 11242 true Scaffold4197: 26102-37343 Arabidopsis halleri
Araha.4197s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold4197: 27344-37343 Arabidopsis halleri
Araha.4197s0012 10.0kb downstream 10.0kb downstream 11242 true Scaffold4197: 16102-27343 Arabidopsis halleri
Araha.4197s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold4197: 16102-26101 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368003 5261 Brassicaceae View MSA
123799466 5264 Brassicales-Malvales View MSA
124296984 5266 SBM View MSA
124148993 5268 Malvidae View MSA
124063057 5270 Rosid View MSA
123740553 5271 Pentapetalae View MSA
122796755 5272 Eudicot View MSA
122043867 5273 Angiosperm View MSA
121310202 5274 Embryophyte View MSA
123347759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain