Gene : Araha.4590s0004 A. halleri v1.1

Defline:  (1 of 5) PTHR13871:SF42 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4
Name:  ? Araha.4590s0004 Secondary Identifier:  ? PAC:28840363

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4590s0004 0.5kb upstream 0.5kb upstream 1390 true Scaffold4590: 17348-18737 Arabidopsis halleri
Araha.4590s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4590: 17348-17847 Arabidopsis halleri
Araha.4590s0004 0.5kb downstream 0.5kb downstream 1390 true Scaffold4590: 17848-19237 Arabidopsis halleri
Araha.4590s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4590: 18738-19237 Arabidopsis halleri
Araha.4590s0004 1.0kb upstream 1.0kb upstream 1890 true Scaffold4590: 16848-18737 Arabidopsis halleri
Araha.4590s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4590: 16848-17847 Arabidopsis halleri
Araha.4590s0004 1.0kb downstream 1.0kb downstream 1890 true Scaffold4590: 17848-19737 Arabidopsis halleri
Araha.4590s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4590: 18738-19737 Arabidopsis halleri
Araha.4590s0004 2.0kb upstream 2.0kb upstream 2890 true Scaffold4590: 15848-18737 Arabidopsis halleri
Araha.4590s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4590: 15848-17847 Arabidopsis halleri
Araha.4590s0004 2.0kb downstream 2.0kb downstream 2890 true Scaffold4590: 17848-20737 Arabidopsis halleri
Araha.4590s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4590: 18738-20737 Arabidopsis halleri
Araha.4590s0004 5.0kb upstream 5.0kb upstream 5890 true Scaffold4590: 12848-18737 Arabidopsis halleri
Araha.4590s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4590: 12848-17847 Arabidopsis halleri
Araha.4590s0004 5.0kb downstream 5.0kb downstream 5890 true Scaffold4590: 17848-23737 Arabidopsis halleri
Araha.4590s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4590: 18738-23737 Arabidopsis halleri
Araha.4590s0004 10.0kb upstream 10.0kb upstream 10890 true Scaffold4590: 7848-18737 Arabidopsis halleri
Araha.4590s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4590: 7848-17847 Arabidopsis halleri
Araha.4590s0004 10.0kb downstream 10.0kb downstream 7364 true Scaffold4590: 17848-25211 Arabidopsis halleri
Araha.4590s0004 10.0kb downstream 10.0kb downstream 6474 false Scaffold4590: 18738-25211 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338305 5261 Brassicaceae View MSA
123841586 5264 Brassicales-Malvales View MSA
124322960 5266 SBM View MSA
124254398 5268 Malvidae View MSA
124074653 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain