Gene : Araha.4378s0004 A. halleri v1.1
Defline:  (1 of 2) PTHR11751//PTHR11751:SF369 - SUBGROUP I AMINOTRANSFERASE RELATED Genomic Order:  4
Name:  ? Araha.4378s0004 Secondary Identifier:  ? PAC:28845733
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ALANINE-DEG3-PWY Arabidopsis halleri pathologic  
Ahalleri ALANINE-SYN2-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-7115 Arabidopsis halleri pathologic  
Ahalleri PWY-7117 Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4378s0004 0.5kb upstream 0.5kb upstream 3293 true Scaffold4378: 12580-15872 Arabidopsis halleri
Araha.4378s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4378: 12580-13079 Arabidopsis halleri
Araha.4378s0004 0.5kb downstream 0.5kb downstream 3293 true Scaffold4378: 13080-16372 Arabidopsis halleri
Araha.4378s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4378: 15873-16372 Arabidopsis halleri
Araha.4378s0004 1.0kb upstream 1.0kb upstream 3793 true Scaffold4378: 12080-15872 Arabidopsis halleri
Araha.4378s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4378: 12080-13079 Arabidopsis halleri
Araha.4378s0004 1.0kb downstream 1.0kb downstream 3793 true Scaffold4378: 13080-16872 Arabidopsis halleri
Araha.4378s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4378: 15873-16872 Arabidopsis halleri
Araha.4378s0004 2.0kb upstream 2.0kb upstream 4793 true Scaffold4378: 11080-15872 Arabidopsis halleri
Araha.4378s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4378: 11080-13079 Arabidopsis halleri
Araha.4378s0004 2.0kb downstream 2.0kb downstream 4793 true Scaffold4378: 13080-17872 Arabidopsis halleri
Araha.4378s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4378: 15873-17872 Arabidopsis halleri
Araha.4378s0004 5.0kb upstream 5.0kb upstream 7793 true Scaffold4378: 8080-15872 Arabidopsis halleri
Araha.4378s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4378: 8080-13079 Arabidopsis halleri
Araha.4378s0004 5.0kb downstream 5.0kb downstream 7793 true Scaffold4378: 13080-20872 Arabidopsis halleri
Araha.4378s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4378: 15873-20872 Arabidopsis halleri
Araha.4378s0004 10.0kb upstream 10.0kb upstream 12793 true Scaffold4378: 3080-15872 Arabidopsis halleri
Araha.4378s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4378: 3080-13079 Arabidopsis halleri
Araha.4378s0004 10.0kb downstream 10.0kb downstream 12793 true Scaffold4378: 13080-25872 Arabidopsis halleri
Araha.4378s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold4378: 15873-25872 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375790 5261 Brassicaceae View MSA
123836852 5264 Brassicales-Malvales View MSA
124344699 5266 SBM View MSA
124251764 5268 Malvidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain