Gene : Araha.4299s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR13069:SF8 - 2-OXOGLUTARATE AND FE-DEPENDENT OXYGENASE FAMILY PROTEIN Genomic Order:  1
Name:  ? Araha.4299s0001 Secondary Identifier:  ? PAC:28858629
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6829 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4299s0001 0.5kb upstream 0.5kb upstream 2212 true Scaffold4299: 1585-3796 Arabidopsis halleri
Araha.4299s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4299: 3297-3796 Arabidopsis halleri
Araha.4299s0001 0.5kb downstream 0.5kb downstream 2212 true Scaffold4299: 1085-3296 Arabidopsis halleri
Araha.4299s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4299: 1085-1584 Arabidopsis halleri
Araha.4299s0001 1.0kb upstream 1.0kb upstream 2712 true Scaffold4299: 1585-4296 Arabidopsis halleri
Araha.4299s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4299: 3297-4296 Arabidopsis halleri
Araha.4299s0001 1.0kb downstream 1.0kb downstream 2712 true Scaffold4299: 585-3296 Arabidopsis halleri
Araha.4299s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4299: 585-1584 Arabidopsis halleri
Araha.4299s0001 2.0kb upstream 2.0kb upstream 3712 true Scaffold4299: 1585-5296 Arabidopsis halleri
Araha.4299s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4299: 3297-5296 Arabidopsis halleri
Araha.4299s0001 2.0kb downstream 2.0kb downstream 3296 true Scaffold4299: 1-3296 Arabidopsis halleri
Araha.4299s0001 2.0kb downstream 2.0kb downstream 1584 false Scaffold4299: 1-1584 Arabidopsis halleri
Araha.4299s0001 5.0kb upstream 5.0kb upstream 6712 true Scaffold4299: 1585-8296 Arabidopsis halleri
Araha.4299s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold4299: 3297-8296 Arabidopsis halleri
Araha.4299s0001 5.0kb downstream 5.0kb downstream 3296 true Scaffold4299: 1-3296 Arabidopsis halleri
Araha.4299s0001 5.0kb downstream 5.0kb downstream 1584 false Scaffold4299: 1-1584 Arabidopsis halleri
Araha.4299s0001 10.0kb upstream 10.0kb upstream 11712 true Scaffold4299: 1585-13296 Arabidopsis halleri
Araha.4299s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold4299: 3297-13296 Arabidopsis halleri
Araha.4299s0001 10.0kb downstream 10.0kb downstream 3296 true Scaffold4299: 1-3296 Arabidopsis halleri
Araha.4299s0001 10.0kb downstream 10.0kb downstream 1584 false Scaffold4299: 1-1584 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368205 5261 Brassicaceae View MSA
123836574 5264 Brassicales-Malvales View MSA
124322185 5266 SBM View MSA
124242136 5268 Malvidae View MSA
124068599 5270 Rosid View MSA
123740892 5271 Pentapetalae View MSA
122793671 5272 Eudicot View MSA
122046991 5273 Angiosperm View MSA
121347521 5274 Embryophyte View MSA
123425237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain