Gene : Araha.4352s0003 A. halleri v1.1

Defline:  (1 of 5) PF11961 - Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  3
Name:  ? Araha.4352s0003 Secondary Identifier:  ? PAC:28853315

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4352s0003 0.5kb upstream 0.5kb upstream 4688 true Scaffold4352: 11628-16315 Arabidopsis halleri
Araha.4352s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4352: 11628-12127 Arabidopsis halleri
Araha.4352s0003 0.5kb downstream 0.5kb downstream 4688 true Scaffold4352: 12128-16815 Arabidopsis halleri
Araha.4352s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4352: 16316-16815 Arabidopsis halleri
Araha.4352s0003 1.0kb upstream 1.0kb upstream 5188 true Scaffold4352: 11128-16315 Arabidopsis halleri
Araha.4352s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4352: 11128-12127 Arabidopsis halleri
Araha.4352s0003 1.0kb downstream 1.0kb downstream 5188 true Scaffold4352: 12128-17315 Arabidopsis halleri
Araha.4352s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4352: 16316-17315 Arabidopsis halleri
Araha.4352s0003 2.0kb upstream 2.0kb upstream 6188 true Scaffold4352: 10128-16315 Arabidopsis halleri
Araha.4352s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4352: 10128-12127 Arabidopsis halleri
Araha.4352s0003 2.0kb downstream 2.0kb downstream 6188 true Scaffold4352: 12128-18315 Arabidopsis halleri
Araha.4352s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4352: 16316-18315 Arabidopsis halleri
Araha.4352s0003 5.0kb upstream 5.0kb upstream 9188 true Scaffold4352: 7128-16315 Arabidopsis halleri
Araha.4352s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4352: 7128-12127 Arabidopsis halleri
Araha.4352s0003 5.0kb downstream 5.0kb downstream 6198 true Scaffold4352: 12128-18325 Arabidopsis halleri
Araha.4352s0003 5.0kb downstream 5.0kb downstream 2010 false Scaffold4352: 16316-18325 Arabidopsis halleri
Araha.4352s0003 10.0kb upstream 10.0kb upstream 14188 true Scaffold4352: 2128-16315 Arabidopsis halleri
Araha.4352s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4352: 2128-12127 Arabidopsis halleri
Araha.4352s0003 10.0kb downstream 10.0kb downstream 6198 true Scaffold4352: 12128-18325 Arabidopsis halleri
Araha.4352s0003 10.0kb downstream 10.0kb downstream 2010 false Scaffold4352: 16316-18325 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691317 5273 Angiosperm View MSA
122370589 5261 Brassicaceae View MSA
123837395 5264 Brassicales-Malvales View MSA
124348001 5266 SBM View MSA
124180961 5268 Malvidae View MSA
124050917 5270 Rosid View MSA
123647177 5271 Pentapetalae View MSA
122681176 5272 Eudicot View MSA
120963176 5274 Embryophyte View MSA
123003532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain