Gene : Araha.4536s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR12801:SF56 - EXONUCLEASE FAMILY PROTEIN Genomic Order:  3
Name:  ? Araha.4536s0003 Secondary Identifier:  ? PAC:28838618

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4536s0003 0.5kb upstream 0.5kb upstream 2474 true Scaffold4536: 17576-20049 Arabidopsis halleri
Araha.4536s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4536: 17576-18075 Arabidopsis halleri
Araha.4536s0003 0.5kb downstream 0.5kb downstream 2474 true Scaffold4536: 18076-20549 Arabidopsis halleri
Araha.4536s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4536: 20050-20549 Arabidopsis halleri
Araha.4536s0003 1.0kb upstream 1.0kb upstream 2974 true Scaffold4536: 17076-20049 Arabidopsis halleri
Araha.4536s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4536: 17076-18075 Arabidopsis halleri
Araha.4536s0003 1.0kb downstream 1.0kb downstream 2974 true Scaffold4536: 18076-21049 Arabidopsis halleri
Araha.4536s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4536: 20050-21049 Arabidopsis halleri
Araha.4536s0003 2.0kb upstream 2.0kb upstream 3974 true Scaffold4536: 16076-20049 Arabidopsis halleri
Araha.4536s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4536: 16076-18075 Arabidopsis halleri
Araha.4536s0003 2.0kb downstream 2.0kb downstream 3974 true Scaffold4536: 18076-22049 Arabidopsis halleri
Araha.4536s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4536: 20050-22049 Arabidopsis halleri
Araha.4536s0003 5.0kb upstream 5.0kb upstream 6974 true Scaffold4536: 13076-20049 Arabidopsis halleri
Araha.4536s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4536: 13076-18075 Arabidopsis halleri
Araha.4536s0003 5.0kb downstream 5.0kb downstream 6974 true Scaffold4536: 18076-25049 Arabidopsis halleri
Araha.4536s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4536: 20050-25049 Arabidopsis halleri
Araha.4536s0003 10.0kb upstream 10.0kb upstream 11974 true Scaffold4536: 8076-20049 Arabidopsis halleri
Araha.4536s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4536: 8076-18075 Arabidopsis halleri
Araha.4536s0003 10.0kb downstream 10.0kb downstream 11974 true Scaffold4536: 18076-30049 Arabidopsis halleri
Araha.4536s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold4536: 20050-30049 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380390 5261 Brassicaceae View MSA
123832480 5264 Brassicales-Malvales View MSA
124338970 5266 SBM View MSA
124240653 5268 Malvidae View MSA
124063595 5270 Rosid View MSA
123750335 5271 Pentapetalae View MSA
122794102 5272 Eudicot View MSA
122048562 5273 Angiosperm View MSA
121349670 5274 Embryophyte View MSA
123428502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain