Gene : Araha.4543s0002 A. halleri v1.1
Defline:  (1 of 1) PTHR21319:SF12 - RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  2
Name:  ? Araha.4543s0002 Secondary Identifier:  ? PAC:28852231
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4543s0002 0.5kb upstream 0.5kb upstream 2902 true Scaffold4543: 4654-7555 Arabidopsis halleri
Araha.4543s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4543: 7056-7555 Arabidopsis halleri
Araha.4543s0002 0.5kb downstream 0.5kb downstream 2902 true Scaffold4543: 4154-7055 Arabidopsis halleri
Araha.4543s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4543: 4154-4653 Arabidopsis halleri
Araha.4543s0002 1.0kb upstream 1.0kb upstream 3402 true Scaffold4543: 4654-8055 Arabidopsis halleri
Araha.4543s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4543: 7056-8055 Arabidopsis halleri
Araha.4543s0002 1.0kb downstream 1.0kb downstream 3402 true Scaffold4543: 3654-7055 Arabidopsis halleri
Araha.4543s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4543: 3654-4653 Arabidopsis halleri
Araha.4543s0002 2.0kb upstream 2.0kb upstream 4402 true Scaffold4543: 4654-9055 Arabidopsis halleri
Araha.4543s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4543: 7056-9055 Arabidopsis halleri
Araha.4543s0002 2.0kb downstream 2.0kb downstream 4402 true Scaffold4543: 2654-7055 Arabidopsis halleri
Araha.4543s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4543: 2654-4653 Arabidopsis halleri
Araha.4543s0002 5.0kb upstream 5.0kb upstream 7402 true Scaffold4543: 4654-12055 Arabidopsis halleri
Araha.4543s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4543: 7056-12055 Arabidopsis halleri
Araha.4543s0002 5.0kb downstream 5.0kb downstream 7055 true Scaffold4543: 1-7055 Arabidopsis halleri
Araha.4543s0002 5.0kb downstream 5.0kb downstream 4653 false Scaffold4543: 1-4653 Arabidopsis halleri
Araha.4543s0002 10.0kb upstream 10.0kb upstream 12402 true Scaffold4543: 4654-17055 Arabidopsis halleri
Araha.4543s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold4543: 7056-17055 Arabidopsis halleri
Araha.4543s0002 10.0kb downstream 10.0kb downstream 7055 true Scaffold4543: 1-7055 Arabidopsis halleri
Araha.4543s0002 10.0kb downstream 10.0kb downstream 4653 false Scaffold4543: 1-4653 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370745 5261 Brassicaceae View MSA
123831380 5264 Brassicales-Malvales View MSA
124321725 5266 SBM View MSA
124239052 5268 Malvidae View MSA
124050337 5270 Rosid View MSA
123740873 5271 Pentapetalae View MSA
122769993 5272 Eudicot View MSA
122043981 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121310221 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain