Gene : Araha.4486s0005 A. halleri v1.1

Defline:  (1 of 1) 3.2.2.23 - DNA-formamidopyrimidine glycosylase / Formamidopyrimidine-DNA glycosylase Genomic Order:  5
Name:  ? Araha.4486s0005 Secondary Identifier:  ? PAC:28846286

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4486s0005 0.5kb upstream 0.5kb upstream 3322 true Scaffold4486: 16931-20252 Arabidopsis halleri
Araha.4486s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4486: 16931-17430 Arabidopsis halleri
Araha.4486s0005 0.5kb downstream 0.5kb downstream 3322 true Scaffold4486: 17431-20752 Arabidopsis halleri
Araha.4486s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4486: 20253-20752 Arabidopsis halleri
Araha.4486s0005 1.0kb upstream 1.0kb upstream 3822 true Scaffold4486: 16431-20252 Arabidopsis halleri
Araha.4486s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4486: 16431-17430 Arabidopsis halleri
Araha.4486s0005 1.0kb downstream 1.0kb downstream 3822 true Scaffold4486: 17431-21252 Arabidopsis halleri
Araha.4486s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4486: 20253-21252 Arabidopsis halleri
Araha.4486s0005 2.0kb upstream 2.0kb upstream 4822 true Scaffold4486: 15431-20252 Arabidopsis halleri
Araha.4486s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4486: 15431-17430 Arabidopsis halleri
Araha.4486s0005 2.0kb downstream 2.0kb downstream 4822 true Scaffold4486: 17431-22252 Arabidopsis halleri
Araha.4486s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4486: 20253-22252 Arabidopsis halleri
Araha.4486s0005 5.0kb upstream 5.0kb upstream 7822 true Scaffold4486: 12431-20252 Arabidopsis halleri
Araha.4486s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4486: 12431-17430 Arabidopsis halleri
Araha.4486s0005 5.0kb downstream 5.0kb downstream 7822 true Scaffold4486: 17431-25252 Arabidopsis halleri
Araha.4486s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4486: 20253-25252 Arabidopsis halleri
Araha.4486s0005 10.0kb upstream 10.0kb upstream 12822 true Scaffold4486: 7431-20252 Arabidopsis halleri
Araha.4486s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4486: 7431-17430 Arabidopsis halleri
Araha.4486s0005 10.0kb downstream 10.0kb downstream 12822 true Scaffold4486: 17431-30252 Arabidopsis halleri
Araha.4486s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4486: 20253-30252 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378446 5261 Brassicaceae View MSA
123836814 5264 Brassicales-Malvales View MSA
124346816 5266 SBM View MSA
124245490 5268 Malvidae View MSA
124069357 5270 Rosid View MSA
123741491 5271 Pentapetalae View MSA
122770061 5272 Eudicot View MSA
122048986 5273 Angiosperm View MSA
121348452 5274 Embryophyte View MSA
123427632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain