Gene : Araha.4848s0002 A. halleri v1.1

Defline:  (1 of 4) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  2
Name:  ? Araha.4848s0002 Secondary Identifier:  ? PAC:28862651

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4848s0002 0.5kb upstream 0.5kb upstream 3231 true Scaffold4848: 3098-6328 Arabidopsis halleri
Araha.4848s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4848: 3098-3597 Arabidopsis halleri
Araha.4848s0002 0.5kb downstream 0.5kb downstream 3231 true Scaffold4848: 3598-6828 Arabidopsis halleri
Araha.4848s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4848: 6329-6828 Arabidopsis halleri
Araha.4848s0002 1.0kb upstream 1.0kb upstream 3731 true Scaffold4848: 2598-6328 Arabidopsis halleri
Araha.4848s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4848: 2598-3597 Arabidopsis halleri
Araha.4848s0002 1.0kb downstream 1.0kb downstream 3731 true Scaffold4848: 3598-7328 Arabidopsis halleri
Araha.4848s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4848: 6329-7328 Arabidopsis halleri
Araha.4848s0002 2.0kb upstream 2.0kb upstream 4731 true Scaffold4848: 1598-6328 Arabidopsis halleri
Araha.4848s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4848: 1598-3597 Arabidopsis halleri
Araha.4848s0002 2.0kb downstream 2.0kb downstream 4731 true Scaffold4848: 3598-8328 Arabidopsis halleri
Araha.4848s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4848: 6329-8328 Arabidopsis halleri
Araha.4848s0002 5.0kb upstream 5.0kb upstream 6328 true Scaffold4848: 1-6328 Arabidopsis halleri
Araha.4848s0002 5.0kb upstream 5.0kb upstream 3597 false Scaffold4848: 1-3597 Arabidopsis halleri
Araha.4848s0002 5.0kb downstream 5.0kb downstream 7731 true Scaffold4848: 3598-11328 Arabidopsis halleri
Araha.4848s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4848: 6329-11328 Arabidopsis halleri
Araha.4848s0002 10.0kb upstream 10.0kb upstream 6328 true Scaffold4848: 1-6328 Arabidopsis halleri
Araha.4848s0002 10.0kb upstream 10.0kb upstream 3597 false Scaffold4848: 1-3597 Arabidopsis halleri
Araha.4848s0002 10.0kb downstream 10.0kb downstream 12731 true Scaffold4848: 3598-16328 Arabidopsis halleri
Araha.4848s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4848: 6329-16328 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368780 5261 Brassicaceae View MSA
123799655 5264 Brassicales-Malvales View MSA
124297153 5266 SBM View MSA
124149113 5268 Malvidae View MSA
123874984 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain