Gene : Araha.4706s0015 A. halleri v1.1

Defline:  (1 of 1) PTHR11062//PTHR11062:SF90 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  15
Name:  ? Araha.4706s0015 Secondary Identifier:  ? PAC:28843721

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5980 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4706s0015 0.5kb upstream 0.5kb upstream 2268 true Scaffold4706: 48574-50841 Arabidopsis halleri
Araha.4706s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold4706: 48574-49073 Arabidopsis halleri
Araha.4706s0015 0.5kb downstream 0.5kb downstream 2268 true Scaffold4706: 49074-51341 Arabidopsis halleri
Araha.4706s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold4706: 50842-51341 Arabidopsis halleri
Araha.4706s0015 1.0kb upstream 1.0kb upstream 2768 true Scaffold4706: 48074-50841 Arabidopsis halleri
Araha.4706s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold4706: 48074-49073 Arabidopsis halleri
Araha.4706s0015 1.0kb downstream 1.0kb downstream 2768 true Scaffold4706: 49074-51841 Arabidopsis halleri
Araha.4706s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold4706: 50842-51841 Arabidopsis halleri
Araha.4706s0015 2.0kb upstream 2.0kb upstream 3768 true Scaffold4706: 47074-50841 Arabidopsis halleri
Araha.4706s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold4706: 47074-49073 Arabidopsis halleri
Araha.4706s0015 2.0kb downstream 2.0kb downstream 3768 true Scaffold4706: 49074-52841 Arabidopsis halleri
Araha.4706s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold4706: 50842-52841 Arabidopsis halleri
Araha.4706s0015 5.0kb upstream 5.0kb upstream 6768 true Scaffold4706: 44074-50841 Arabidopsis halleri
Araha.4706s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold4706: 44074-49073 Arabidopsis halleri
Araha.4706s0015 5.0kb downstream 5.0kb downstream 6768 true Scaffold4706: 49074-55841 Arabidopsis halleri
Araha.4706s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold4706: 50842-55841 Arabidopsis halleri
Araha.4706s0015 10.0kb upstream 10.0kb upstream 11768 true Scaffold4706: 39074-50841 Arabidopsis halleri
Araha.4706s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold4706: 39074-49073 Arabidopsis halleri
Araha.4706s0015 10.0kb downstream 10.0kb downstream 11768 true Scaffold4706: 49074-60841 Arabidopsis halleri
Araha.4706s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold4706: 50842-60841 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365835 5261 Brassicaceae View MSA
123835010 5264 Brassicales-Malvales View MSA
124321992 5266 SBM View MSA
124246530 5268 Malvidae View MSA
124070625 5270 Rosid View MSA
123746709 5271 Pentapetalae View MSA
122795318 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain