Gene : Araha.4687s0005 A. halleri v1.1

Defline:  (1 of 1) PTHR21649:SF17 - CHLOROPHYLL A-B BINDING PROTEIN 4, CHLOROPLASTIC Genomic Order:  5
Name:  ? Araha.4687s0005 Secondary Identifier:  ? PAC:28839822

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4687s0005 0.5kb upstream 0.5kb upstream 1442 true Scaffold4687: 26599-28040 Arabidopsis halleri
Araha.4687s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4687: 26599-27098 Arabidopsis halleri
Araha.4687s0005 0.5kb downstream 0.5kb downstream 1442 true Scaffold4687: 27099-28540 Arabidopsis halleri
Araha.4687s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4687: 28041-28540 Arabidopsis halleri
Araha.4687s0005 1.0kb upstream 1.0kb upstream 1942 true Scaffold4687: 26099-28040 Arabidopsis halleri
Araha.4687s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4687: 26099-27098 Arabidopsis halleri
Araha.4687s0005 1.0kb downstream 1.0kb downstream 1942 true Scaffold4687: 27099-29040 Arabidopsis halleri
Araha.4687s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4687: 28041-29040 Arabidopsis halleri
Araha.4687s0005 2.0kb upstream 2.0kb upstream 2942 true Scaffold4687: 25099-28040 Arabidopsis halleri
Araha.4687s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4687: 25099-27098 Arabidopsis halleri
Araha.4687s0005 2.0kb downstream 2.0kb downstream 2942 true Scaffold4687: 27099-30040 Arabidopsis halleri
Araha.4687s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4687: 28041-30040 Arabidopsis halleri
Araha.4687s0005 5.0kb upstream 5.0kb upstream 5942 true Scaffold4687: 22099-28040 Arabidopsis halleri
Araha.4687s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4687: 22099-27098 Arabidopsis halleri
Araha.4687s0005 5.0kb downstream 5.0kb downstream 5942 true Scaffold4687: 27099-33040 Arabidopsis halleri
Araha.4687s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4687: 28041-33040 Arabidopsis halleri
Araha.4687s0005 10.0kb upstream 10.0kb upstream 10942 true Scaffold4687: 17099-28040 Arabidopsis halleri
Araha.4687s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4687: 17099-27098 Arabidopsis halleri
Araha.4687s0005 10.0kb downstream 10.0kb downstream 10942 true Scaffold4687: 27099-38040 Arabidopsis halleri
Araha.4687s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4687: 28041-38040 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372804 5261 Brassicaceae View MSA
123834792 5264 Brassicales-Malvales View MSA
124341061 5266 SBM View MSA
124239114 5268 Malvidae View MSA
124068607 5270 Rosid View MSA
123738583 5271 Pentapetalae View MSA
122789063 5272 Eudicot View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain