Gene : Araha.5000s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR10210:SF58 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 5, CHLOROPLASTIC Genomic Order:  4
Name:  ? Araha.5000s0004 Secondary Identifier:  ? PAC:28840282
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY0-662 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5000s0004 0.5kb upstream 0.5kb upstream 2991 true Scaffold5000: 16461-19451 Arabidopsis halleri
Araha.5000s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5000: 16461-16960 Arabidopsis halleri
Araha.5000s0004 0.5kb downstream 0.5kb downstream 2991 true Scaffold5000: 16961-19951 Arabidopsis halleri
Araha.5000s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5000: 19452-19951 Arabidopsis halleri
Araha.5000s0004 1.0kb upstream 1.0kb upstream 3491 true Scaffold5000: 15961-19451 Arabidopsis halleri
Araha.5000s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5000: 15961-16960 Arabidopsis halleri
Araha.5000s0004 1.0kb downstream 1.0kb downstream 3491 true Scaffold5000: 16961-20451 Arabidopsis halleri
Araha.5000s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5000: 19452-20451 Arabidopsis halleri
Araha.5000s0004 2.0kb upstream 2.0kb upstream 4491 true Scaffold5000: 14961-19451 Arabidopsis halleri
Araha.5000s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5000: 14961-16960 Arabidopsis halleri
Araha.5000s0004 2.0kb downstream 2.0kb downstream 4491 true Scaffold5000: 16961-21451 Arabidopsis halleri
Araha.5000s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5000: 19452-21451 Arabidopsis halleri
Araha.5000s0004 5.0kb upstream 5.0kb upstream 7491 true Scaffold5000: 11961-19451 Arabidopsis halleri
Araha.5000s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5000: 11961-16960 Arabidopsis halleri
Araha.5000s0004 5.0kb downstream 5.0kb downstream 7491 true Scaffold5000: 16961-24451 Arabidopsis halleri
Araha.5000s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5000: 19452-24451 Arabidopsis halleri
Araha.5000s0004 10.0kb upstream 10.0kb upstream 12491 true Scaffold5000: 6961-19451 Arabidopsis halleri
Araha.5000s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5000: 6961-16960 Arabidopsis halleri
Araha.5000s0004 10.0kb downstream 10.0kb downstream 12491 true Scaffold5000: 16961-29451 Arabidopsis halleri
Araha.5000s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5000: 19452-29451 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361116 5261 Brassicaceae View MSA
123829238 5264 Brassicales-Malvales View MSA
124341490 5266 SBM View MSA
124240392 5268 Malvidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain