Gene : Araha.5004s0001 A. halleri v1.1

Defline:  (1 of 4) PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Genomic Order:  1
Name:  ? Araha.5004s0001 Secondary Identifier:  ? PAC:28855660

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5004s0001 0.5kb upstream 0.5kb upstream 5221 true Scaffold5004: 3-5223 Arabidopsis halleri
Araha.5004s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5004: 4724-5223 Arabidopsis halleri
Araha.5004s0001 0.5kb downstream 0.5kb downstream 4723 true Scaffold5004: 1-4723 Arabidopsis halleri
Araha.5004s0001 0.5kb downstream 0.5kb downstream 2 false Scaffold5004: 1-2 Arabidopsis halleri
Araha.5004s0001 1.0kb upstream 1.0kb upstream 5721 true Scaffold5004: 3-5723 Arabidopsis halleri
Araha.5004s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5004: 4724-5723 Arabidopsis halleri
Araha.5004s0001 1.0kb downstream 1.0kb downstream 4723 true Scaffold5004: 1-4723 Arabidopsis halleri
Araha.5004s0001 1.0kb downstream 1.0kb downstream 2 false Scaffold5004: 1-2 Arabidopsis halleri
Araha.5004s0001 2.0kb upstream 2.0kb upstream 6721 true Scaffold5004: 3-6723 Arabidopsis halleri
Araha.5004s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5004: 4724-6723 Arabidopsis halleri
Araha.5004s0001 2.0kb downstream 2.0kb downstream 4723 true Scaffold5004: 1-4723 Arabidopsis halleri
Araha.5004s0001 2.0kb downstream 2.0kb downstream 2 false Scaffold5004: 1-2 Arabidopsis halleri
Araha.5004s0001 5.0kb upstream 5.0kb upstream 9721 true Scaffold5004: 3-9723 Arabidopsis halleri
Araha.5004s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5004: 4724-9723 Arabidopsis halleri
Araha.5004s0001 5.0kb downstream 5.0kb downstream 4723 true Scaffold5004: 1-4723 Arabidopsis halleri
Araha.5004s0001 5.0kb downstream 5.0kb downstream 2 false Scaffold5004: 1-2 Arabidopsis halleri
Araha.5004s0001 10.0kb upstream 10.0kb upstream 14721 true Scaffold5004: 3-14723 Arabidopsis halleri
Araha.5004s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold5004: 4724-14723 Arabidopsis halleri
Araha.5004s0001 10.0kb downstream 10.0kb downstream 4723 true Scaffold5004: 1-4723 Arabidopsis halleri
Araha.5004s0001 10.0kb downstream 10.0kb downstream 2 false Scaffold5004: 1-2 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338209 5261 Brassicaceae View MSA
123838688 5264 Brassicales-Malvales View MSA
124345430 5266 SBM View MSA
124251609 5268 Malvidae View MSA
124065197 5270 Rosid View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain