Gene : Araha.5006s0019 A. halleri v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF99 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  19
Name:  ? Araha.5006s0019 Secondary Identifier:  ? PAC:28837362
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5980 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5006s0019 0.5kb upstream 0.5kb upstream 2445 true Scaffold5006: 76135-78579 Arabidopsis halleri
Araha.5006s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold5006: 76135-76634 Arabidopsis halleri
Araha.5006s0019 0.5kb downstream 0.5kb downstream 2445 true Scaffold5006: 76635-79079 Arabidopsis halleri
Araha.5006s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold5006: 78580-79079 Arabidopsis halleri
Araha.5006s0019 1.0kb upstream 1.0kb upstream 2945 true Scaffold5006: 75635-78579 Arabidopsis halleri
Araha.5006s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold5006: 75635-76634 Arabidopsis halleri
Araha.5006s0019 1.0kb downstream 1.0kb downstream 2945 true Scaffold5006: 76635-79579 Arabidopsis halleri
Araha.5006s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold5006: 78580-79579 Arabidopsis halleri
Araha.5006s0019 2.0kb upstream 2.0kb upstream 3945 true Scaffold5006: 74635-78579 Arabidopsis halleri
Araha.5006s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold5006: 74635-76634 Arabidopsis halleri
Araha.5006s0019 2.0kb downstream 2.0kb downstream 3945 true Scaffold5006: 76635-80579 Arabidopsis halleri
Araha.5006s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold5006: 78580-80579 Arabidopsis halleri
Araha.5006s0019 5.0kb upstream 5.0kb upstream 6945 true Scaffold5006: 71635-78579 Arabidopsis halleri
Araha.5006s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold5006: 71635-76634 Arabidopsis halleri
Araha.5006s0019 5.0kb downstream 5.0kb downstream 6945 true Scaffold5006: 76635-83579 Arabidopsis halleri
Araha.5006s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold5006: 78580-83579 Arabidopsis halleri
Araha.5006s0019 10.0kb upstream 10.0kb upstream 11945 true Scaffold5006: 66635-78579 Arabidopsis halleri
Araha.5006s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold5006: 66635-76634 Arabidopsis halleri
Araha.5006s0019 10.0kb downstream 10.0kb downstream 11945 true Scaffold5006: 76635-88579 Arabidopsis halleri
Araha.5006s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold5006: 78580-88579 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364043 5261 Brassicaceae View MSA
123827909 5264 Brassicales-Malvales View MSA
124337314 5266 SBM View MSA
124242834 5268 Malvidae View MSA
124068491 5270 Rosid View MSA
123736949 5271 Pentapetalae View MSA
122787546 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain