Gene : Araha.4954s0001 A. halleri v1.1

Defline:  (1 of 2) PTHR34373:SF2 - SHUGOSHIN C TERMINUS Genomic Order:  1
Name:  ? Araha.4954s0001 Secondary Identifier:  ? PAC:28838541

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4954s0001 0.5kb upstream 0.5kb upstream 4312 true Scaffold4954: 482-4793 Arabidopsis halleri
Araha.4954s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4954: 482-981 Arabidopsis halleri
Araha.4954s0001 0.5kb downstream 0.5kb downstream 4312 true Scaffold4954: 982-5293 Arabidopsis halleri
Araha.4954s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4954: 4794-5293 Arabidopsis halleri
Araha.4954s0001 1.0kb upstream 1.0kb upstream 4793 true Scaffold4954: 1-4793 Arabidopsis halleri
Araha.4954s0001 1.0kb upstream 1.0kb upstream 981 false Scaffold4954: 1-981 Arabidopsis halleri
Araha.4954s0001 1.0kb downstream 1.0kb downstream 4812 true Scaffold4954: 982-5793 Arabidopsis halleri
Araha.4954s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4954: 4794-5793 Arabidopsis halleri
Araha.4954s0001 2.0kb upstream 2.0kb upstream 4793 true Scaffold4954: 1-4793 Arabidopsis halleri
Araha.4954s0001 2.0kb upstream 2.0kb upstream 981 false Scaffold4954: 1-981 Arabidopsis halleri
Araha.4954s0001 2.0kb downstream 2.0kb downstream 5812 true Scaffold4954: 982-6793 Arabidopsis halleri
Araha.4954s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4954: 4794-6793 Arabidopsis halleri
Araha.4954s0001 5.0kb upstream 5.0kb upstream 4793 true Scaffold4954: 1-4793 Arabidopsis halleri
Araha.4954s0001 5.0kb upstream 5.0kb upstream 981 false Scaffold4954: 1-981 Arabidopsis halleri
Araha.4954s0001 5.0kb downstream 5.0kb downstream 8812 true Scaffold4954: 982-9793 Arabidopsis halleri
Araha.4954s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4954: 4794-9793 Arabidopsis halleri
Araha.4954s0001 10.0kb upstream 10.0kb upstream 4793 true Scaffold4954: 1-4793 Arabidopsis halleri
Araha.4954s0001 10.0kb upstream 10.0kb upstream 981 false Scaffold4954: 1-981 Arabidopsis halleri
Araha.4954s0001 10.0kb downstream 10.0kb downstream 13812 true Scaffold4954: 982-14793 Arabidopsis halleri
Araha.4954s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4954: 4794-14793 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122380773 5261 Brassicaceae View MSA
123838720 5264 Brassicales-Malvales View MSA
124322493 5266 SBM View MSA
124250251 5268 Malvidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain