Gene : Araha.4968s0005 A. halleri v1.1

Defline:  (1 of 30) PTHR32133:SF82 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  5
Name:  ? Araha.4968s0005 Secondary Identifier:  ? PAC:28848979

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.4968s0005 0.5kb upstream 0.5kb upstream 2779 true Scaffold4968: 8942-11720 Arabidopsis halleri
Araha.4968s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4968: 8942-9441 Arabidopsis halleri
Araha.4968s0005 0.5kb downstream 0.5kb downstream 2779 true Scaffold4968: 9442-12220 Arabidopsis halleri
Araha.4968s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4968: 11721-12220 Arabidopsis halleri
Araha.4968s0005 1.0kb upstream 1.0kb upstream 3279 true Scaffold4968: 8442-11720 Arabidopsis halleri
Araha.4968s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4968: 8442-9441 Arabidopsis halleri
Araha.4968s0005 1.0kb downstream 1.0kb downstream 3279 true Scaffold4968: 9442-12720 Arabidopsis halleri
Araha.4968s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4968: 11721-12720 Arabidopsis halleri
Araha.4968s0005 2.0kb upstream 2.0kb upstream 4279 true Scaffold4968: 7442-11720 Arabidopsis halleri
Araha.4968s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4968: 7442-9441 Arabidopsis halleri
Araha.4968s0005 2.0kb downstream 2.0kb downstream 4279 true Scaffold4968: 9442-13720 Arabidopsis halleri
Araha.4968s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4968: 11721-13720 Arabidopsis halleri
Araha.4968s0005 5.0kb upstream 5.0kb upstream 7279 true Scaffold4968: 4442-11720 Arabidopsis halleri
Araha.4968s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4968: 4442-9441 Arabidopsis halleri
Araha.4968s0005 5.0kb downstream 5.0kb downstream 7279 true Scaffold4968: 9442-16720 Arabidopsis halleri
Araha.4968s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4968: 11721-16720 Arabidopsis halleri
Araha.4968s0005 10.0kb upstream 10.0kb upstream 11720 true Scaffold4968: 1-11720 Arabidopsis halleri
Araha.4968s0005 10.0kb upstream 10.0kb upstream 9441 false Scaffold4968: 1-9441 Arabidopsis halleri
Araha.4968s0005 10.0kb downstream 10.0kb downstream 12279 true Scaffold4968: 9442-21720 Arabidopsis halleri
Araha.4968s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4968: 11721-21720 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381507 5261 Brassicaceae View MSA
123803280 5264 Brassicales-Malvales View MSA
124349957 5266 SBM View MSA
124254638 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain