Gene : Araha.5184s0003 A. halleri v1.1

Defline:  (1 of 1) PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Genomic Order:  3
Name:  ? Araha.5184s0003 Secondary Identifier:  ? PAC:28842365

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5184s0003 0.5kb upstream 0.5kb upstream 2059 true Scaffold5184: 8342-10400 Arabidopsis halleri
Araha.5184s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold5184: 8342-8841 Arabidopsis halleri
Araha.5184s0003 0.5kb downstream 0.5kb downstream 2059 true Scaffold5184: 8842-10900 Arabidopsis halleri
Araha.5184s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold5184: 10401-10900 Arabidopsis halleri
Araha.5184s0003 1.0kb upstream 1.0kb upstream 2559 true Scaffold5184: 7842-10400 Arabidopsis halleri
Araha.5184s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold5184: 7842-8841 Arabidopsis halleri
Araha.5184s0003 1.0kb downstream 1.0kb downstream 2559 true Scaffold5184: 8842-11400 Arabidopsis halleri
Araha.5184s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold5184: 10401-11400 Arabidopsis halleri
Araha.5184s0003 2.0kb upstream 2.0kb upstream 3559 true Scaffold5184: 6842-10400 Arabidopsis halleri
Araha.5184s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold5184: 6842-8841 Arabidopsis halleri
Araha.5184s0003 2.0kb downstream 2.0kb downstream 3559 true Scaffold5184: 8842-12400 Arabidopsis halleri
Araha.5184s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold5184: 10401-12400 Arabidopsis halleri
Araha.5184s0003 5.0kb upstream 5.0kb upstream 6559 true Scaffold5184: 3842-10400 Arabidopsis halleri
Araha.5184s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold5184: 3842-8841 Arabidopsis halleri
Araha.5184s0003 5.0kb downstream 5.0kb downstream 6559 true Scaffold5184: 8842-15400 Arabidopsis halleri
Araha.5184s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold5184: 10401-15400 Arabidopsis halleri
Araha.5184s0003 10.0kb upstream 10.0kb upstream 10400 true Scaffold5184: 1-10400 Arabidopsis halleri
Araha.5184s0003 10.0kb upstream 10.0kb upstream 8841 false Scaffold5184: 1-8841 Arabidopsis halleri
Araha.5184s0003 10.0kb downstream 10.0kb downstream 8237 true Scaffold5184: 8842-17078 Arabidopsis halleri
Araha.5184s0003 10.0kb downstream 10.0kb downstream 6678 false Scaffold5184: 10401-17078 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370999 5261 Brassicaceae View MSA
123840262 5264 Brassicales-Malvales View MSA
124341799 5266 SBM View MSA
124253716 5268 Malvidae View MSA
124066475 5270 Rosid View MSA
123737331 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain