Gene : Araha.5134s0001 A. halleri v1.1

Defline:  (1 of 16) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  1
Name:  ? Araha.5134s0001 Secondary Identifier:  ? PAC:28858411

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5134s0001 0.5kb upstream 0.5kb upstream 998 true Scaffold5134: 3546-4543 Arabidopsis halleri
Araha.5134s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5134: 3546-4045 Arabidopsis halleri
Araha.5134s0001 0.5kb downstream 0.5kb downstream 998 true Scaffold5134: 4046-5043 Arabidopsis halleri
Araha.5134s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5134: 4544-5043 Arabidopsis halleri
Araha.5134s0001 1.0kb upstream 1.0kb upstream 1498 true Scaffold5134: 3046-4543 Arabidopsis halleri
Araha.5134s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5134: 3046-4045 Arabidopsis halleri
Araha.5134s0001 1.0kb downstream 1.0kb downstream 1452 true Scaffold5134: 4046-5497 Arabidopsis halleri
Araha.5134s0001 1.0kb downstream 1.0kb downstream 954 false Scaffold5134: 4544-5497 Arabidopsis halleri
Araha.5134s0001 2.0kb upstream 2.0kb upstream 2498 true Scaffold5134: 2046-4543 Arabidopsis halleri
Araha.5134s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5134: 2046-4045 Arabidopsis halleri
Araha.5134s0001 2.0kb downstream 2.0kb downstream 1452 true Scaffold5134: 4046-5497 Arabidopsis halleri
Araha.5134s0001 2.0kb downstream 2.0kb downstream 954 false Scaffold5134: 4544-5497 Arabidopsis halleri
Araha.5134s0001 5.0kb upstream 5.0kb upstream 4543 true Scaffold5134: 1-4543 Arabidopsis halleri
Araha.5134s0001 5.0kb upstream 5.0kb upstream 4045 false Scaffold5134: 1-4045 Arabidopsis halleri
Araha.5134s0001 5.0kb downstream 5.0kb downstream 1452 true Scaffold5134: 4046-5497 Arabidopsis halleri
Araha.5134s0001 5.0kb downstream 5.0kb downstream 954 false Scaffold5134: 4544-5497 Arabidopsis halleri
Araha.5134s0001 10.0kb upstream 10.0kb upstream 4543 true Scaffold5134: 1-4543 Arabidopsis halleri
Araha.5134s0001 10.0kb upstream 10.0kb upstream 4045 false Scaffold5134: 1-4045 Arabidopsis halleri
Araha.5134s0001 10.0kb downstream 10.0kb downstream 1452 true Scaffold5134: 4046-5497 Arabidopsis halleri
Araha.5134s0001 10.0kb downstream 10.0kb downstream 954 false Scaffold5134: 4544-5497 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381316 5261 Brassicaceae View MSA
123803177 5264 Brassicales-Malvales View MSA
124300307 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain