Gene : Araha.5092s0004 A. halleri v1.1

Defline:  (1 of 2) 3.4.21.72 - IgA-specific serine endopeptidase / Immunoglobulin A1 protease Genomic Order:  4
Name:  ? Araha.5092s0004 Secondary Identifier:  ? PAC:28842956

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5092s0004 0.5kb upstream 0.5kb upstream 2143 true Scaffold5092: 19323-21465 Arabidopsis halleri
Araha.5092s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5092: 19323-19822 Arabidopsis halleri
Araha.5092s0004 0.5kb downstream 0.5kb downstream 2143 true Scaffold5092: 19823-21965 Arabidopsis halleri
Araha.5092s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5092: 21466-21965 Arabidopsis halleri
Araha.5092s0004 1.0kb upstream 1.0kb upstream 2643 true Scaffold5092: 18823-21465 Arabidopsis halleri
Araha.5092s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5092: 18823-19822 Arabidopsis halleri
Araha.5092s0004 1.0kb downstream 1.0kb downstream 2643 true Scaffold5092: 19823-22465 Arabidopsis halleri
Araha.5092s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5092: 21466-22465 Arabidopsis halleri
Araha.5092s0004 2.0kb upstream 2.0kb upstream 3643 true Scaffold5092: 17823-21465 Arabidopsis halleri
Araha.5092s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5092: 17823-19822 Arabidopsis halleri
Araha.5092s0004 2.0kb downstream 2.0kb downstream 3643 true Scaffold5092: 19823-23465 Arabidopsis halleri
Araha.5092s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5092: 21466-23465 Arabidopsis halleri
Araha.5092s0004 5.0kb upstream 5.0kb upstream 6643 true Scaffold5092: 14823-21465 Arabidopsis halleri
Araha.5092s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5092: 14823-19822 Arabidopsis halleri
Araha.5092s0004 5.0kb downstream 5.0kb downstream 6643 true Scaffold5092: 19823-26465 Arabidopsis halleri
Araha.5092s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5092: 21466-26465 Arabidopsis halleri
Araha.5092s0004 10.0kb upstream 10.0kb upstream 11643 true Scaffold5092: 9823-21465 Arabidopsis halleri
Araha.5092s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5092: 9823-19822 Arabidopsis halleri
Araha.5092s0004 10.0kb downstream 10.0kb downstream 11643 true Scaffold5092: 19823-31465 Arabidopsis halleri
Araha.5092s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5092: 21466-31465 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371464 5261 Brassicaceae View MSA
123838591 5264 Brassicales-Malvales View MSA
124338530 5266 SBM View MSA
124244025 5268 Malvidae View MSA
124061642 5270 Rosid View MSA
123748678 5271 Pentapetalae View MSA
122794910 5272 Eudicot View MSA
122051636 5273 Angiosperm View MSA
121349582 5274 Embryophyte View MSA
123381363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain