Gene : Araha.5101s0012 A. halleri v1.1

Defline:  (1 of 1) KOG3026 - Splicing factor SPF30 Genomic Order:  12
Name:  ? Araha.5101s0012 Secondary Identifier:  ? PAC:28842881

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5101s0012 0.5kb upstream 0.5kb upstream 3163 true Scaffold5101: 68462-71624 Arabidopsis halleri
Araha.5101s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold5101: 71125-71624 Arabidopsis halleri
Araha.5101s0012 0.5kb downstream 0.5kb downstream 3163 true Scaffold5101: 67962-71124 Arabidopsis halleri
Araha.5101s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold5101: 67962-68461 Arabidopsis halleri
Araha.5101s0012 1.0kb upstream 1.0kb upstream 3663 true Scaffold5101: 68462-72124 Arabidopsis halleri
Araha.5101s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold5101: 71125-72124 Arabidopsis halleri
Araha.5101s0012 1.0kb downstream 1.0kb downstream 3663 true Scaffold5101: 67462-71124 Arabidopsis halleri
Araha.5101s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold5101: 67462-68461 Arabidopsis halleri
Araha.5101s0012 2.0kb upstream 2.0kb upstream 4663 true Scaffold5101: 68462-73124 Arabidopsis halleri
Araha.5101s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold5101: 71125-73124 Arabidopsis halleri
Araha.5101s0012 2.0kb downstream 2.0kb downstream 4663 true Scaffold5101: 66462-71124 Arabidopsis halleri
Araha.5101s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold5101: 66462-68461 Arabidopsis halleri
Araha.5101s0012 5.0kb upstream 5.0kb upstream 6540 true Scaffold5101: 68462-75001 Arabidopsis halleri
Araha.5101s0012 5.0kb upstream 5.0kb upstream 3877 false Scaffold5101: 71125-75001 Arabidopsis halleri
Araha.5101s0012 5.0kb downstream 5.0kb downstream 7663 true Scaffold5101: 63462-71124 Arabidopsis halleri
Araha.5101s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold5101: 63462-68461 Arabidopsis halleri
Araha.5101s0012 10.0kb upstream 10.0kb upstream 6540 true Scaffold5101: 68462-75001 Arabidopsis halleri
Araha.5101s0012 10.0kb upstream 10.0kb upstream 3877 false Scaffold5101: 71125-75001 Arabidopsis halleri
Araha.5101s0012 10.0kb downstream 10.0kb downstream 12663 true Scaffold5101: 58462-71124 Arabidopsis halleri
Araha.5101s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold5101: 58462-68461 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374958 5261 Brassicaceae View MSA
123835748 5264 Brassicales-Malvales View MSA
124338720 5266 SBM View MSA
124242162 5268 Malvidae View MSA
124061693 5270 Rosid View MSA
123752320 5271 Pentapetalae View MSA
122796716 5272 Eudicot View MSA
122043131 5273 Angiosperm View MSA
121344735 5274 Embryophyte View MSA
123424972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain