Gene : Araha.5052s0001 A. halleri v1.1
Defline:  (1 of 2) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase Genomic Order:  1
Name:  ? Araha.5052s0001 Secondary Identifier:  ? PAC:28854093
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri LEU-DEG2-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5052s0001 0.5kb upstream 0.5kb upstream 4896 true Scaffold5052: 323-5218 Arabidopsis halleri
Araha.5052s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5052: 323-822 Arabidopsis halleri
Araha.5052s0001 0.5kb downstream 0.5kb downstream 4896 true Scaffold5052: 823-5718 Arabidopsis halleri
Araha.5052s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5052: 5219-5718 Arabidopsis halleri
Araha.5052s0001 1.0kb upstream 1.0kb upstream 5218 true Scaffold5052: 1-5218 Arabidopsis halleri
Araha.5052s0001 1.0kb upstream 1.0kb upstream 822 false Scaffold5052: 1-822 Arabidopsis halleri
Araha.5052s0001 1.0kb downstream 1.0kb downstream 5396 true Scaffold5052: 823-6218 Arabidopsis halleri
Araha.5052s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5052: 5219-6218 Arabidopsis halleri
Araha.5052s0001 2.0kb upstream 2.0kb upstream 5218 true Scaffold5052: 1-5218 Arabidopsis halleri
Araha.5052s0001 2.0kb upstream 2.0kb upstream 822 false Scaffold5052: 1-822 Arabidopsis halleri
Araha.5052s0001 2.0kb downstream 2.0kb downstream 6396 true Scaffold5052: 823-7218 Arabidopsis halleri
Araha.5052s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5052: 5219-7218 Arabidopsis halleri
Araha.5052s0001 5.0kb upstream 5.0kb upstream 5218 true Scaffold5052: 1-5218 Arabidopsis halleri
Araha.5052s0001 5.0kb upstream 5.0kb upstream 822 false Scaffold5052: 1-822 Arabidopsis halleri
Araha.5052s0001 5.0kb downstream 5.0kb downstream 9396 true Scaffold5052: 823-10218 Arabidopsis halleri
Araha.5052s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5052: 5219-10218 Arabidopsis halleri
Araha.5052s0001 10.0kb upstream 10.0kb upstream 5218 true Scaffold5052: 1-5218 Arabidopsis halleri
Araha.5052s0001 10.0kb upstream 10.0kb upstream 822 false Scaffold5052: 1-822 Arabidopsis halleri
Araha.5052s0001 10.0kb downstream 10.0kb downstream 14396 true Scaffold5052: 823-15218 Arabidopsis halleri
Araha.5052s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5052: 5219-15218 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373032 5261 Brassicaceae View MSA
123827845 5264 Brassicales-Malvales View MSA
124337820 5266 SBM View MSA
124239007 5268 Malvidae View MSA
124062314 5270 Rosid View MSA
123743627 5271 Pentapetalae View MSA
122788393 5272 Eudicot View MSA
122046633 5273 Angiosperm View MSA
121344540 5274 Embryophyte View MSA
123425779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain