Gene : Araha.5052s0041 A. halleri v1.1
Defline:  (1 of 2) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  41
Name:  ? Araha.5052s0041 Secondary Identifier:  ? PAC:28854068
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CHLOROPHYLL-SYN Arabidopsis halleri pathologic  
Ahalleri HEME-BIOSYNTHESIS-II Arabidopsis halleri pathologic  
Ahalleri PWY-5918 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5052s0041 0.5kb upstream 0.5kb upstream 2655 true Scaffold5052: 161381-164035 Arabidopsis halleri
Araha.5052s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold5052: 163536-164035 Arabidopsis halleri
Araha.5052s0041 0.5kb downstream 0.5kb downstream 2655 true Scaffold5052: 160881-163535 Arabidopsis halleri
Araha.5052s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold5052: 160881-161380 Arabidopsis halleri
Araha.5052s0041 1.0kb upstream 1.0kb upstream 3155 true Scaffold5052: 161381-164535 Arabidopsis halleri
Araha.5052s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold5052: 163536-164535 Arabidopsis halleri
Araha.5052s0041 1.0kb downstream 1.0kb downstream 3155 true Scaffold5052: 160381-163535 Arabidopsis halleri
Araha.5052s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold5052: 160381-161380 Arabidopsis halleri
Araha.5052s0041 2.0kb upstream 2.0kb upstream 4155 true Scaffold5052: 161381-165535 Arabidopsis halleri
Araha.5052s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold5052: 163536-165535 Arabidopsis halleri
Araha.5052s0041 2.0kb downstream 2.0kb downstream 4155 true Scaffold5052: 159381-163535 Arabidopsis halleri
Araha.5052s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold5052: 159381-161380 Arabidopsis halleri
Araha.5052s0041 5.0kb upstream 5.0kb upstream 7155 true Scaffold5052: 161381-168535 Arabidopsis halleri
Araha.5052s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold5052: 163536-168535 Arabidopsis halleri
Araha.5052s0041 5.0kb downstream 5.0kb downstream 7155 true Scaffold5052: 156381-163535 Arabidopsis halleri
Araha.5052s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold5052: 156381-161380 Arabidopsis halleri
Araha.5052s0041 10.0kb upstream 10.0kb upstream 7205 true Scaffold5052: 161381-168585 Arabidopsis halleri
Araha.5052s0041 10.0kb upstream 10.0kb upstream 5050 false Scaffold5052: 163536-168585 Arabidopsis halleri
Araha.5052s0041 10.0kb downstream 10.0kb downstream 12155 true Scaffold5052: 151381-163535 Arabidopsis halleri
Araha.5052s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold5052: 151381-161380 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367913 5261 Brassicaceae View MSA
123838034 5264 Brassicales-Malvales View MSA
124337231 5266 SBM View MSA
124243280 5268 Malvidae View MSA
124062707 5270 Rosid View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain