Gene : Araha.10304s0006 A. halleri v1.1

Defline:  (1 of 2) PTHR16052:SF0 - TBCC DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  6
Name:  ? Araha.10304s0006 Secondary Identifier:  ? PAC:28855010

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10304s0006 0.5kb upstream 0.5kb upstream 3701 true Scaffold10304: 21505-25205 Arabidopsis halleri
Araha.10304s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold10304: 21505-22004 Arabidopsis halleri
Araha.10304s0006 0.5kb downstream 0.5kb downstream 3701 true Scaffold10304: 22005-25705 Arabidopsis halleri
Araha.10304s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold10304: 25206-25705 Arabidopsis halleri
Araha.10304s0006 1.0kb upstream 1.0kb upstream 4201 true Scaffold10304: 21005-25205 Arabidopsis halleri
Araha.10304s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold10304: 21005-22004 Arabidopsis halleri
Araha.10304s0006 1.0kb downstream 1.0kb downstream 4201 true Scaffold10304: 22005-26205 Arabidopsis halleri
Araha.10304s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold10304: 25206-26205 Arabidopsis halleri
Araha.10304s0006 2.0kb upstream 2.0kb upstream 5201 true Scaffold10304: 20005-25205 Arabidopsis halleri
Araha.10304s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold10304: 20005-22004 Arabidopsis halleri
Araha.10304s0006 2.0kb downstream 2.0kb downstream 5201 true Scaffold10304: 22005-27205 Arabidopsis halleri
Araha.10304s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold10304: 25206-27205 Arabidopsis halleri
Araha.10304s0006 5.0kb upstream 5.0kb upstream 8201 true Scaffold10304: 17005-25205 Arabidopsis halleri
Araha.10304s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold10304: 17005-22004 Arabidopsis halleri
Araha.10304s0006 5.0kb downstream 5.0kb downstream 8201 true Scaffold10304: 22005-30205 Arabidopsis halleri
Araha.10304s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold10304: 25206-30205 Arabidopsis halleri
Araha.10304s0006 10.0kb upstream 10.0kb upstream 13201 true Scaffold10304: 12005-25205 Arabidopsis halleri
Araha.10304s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold10304: 12005-22004 Arabidopsis halleri
Araha.10304s0006 10.0kb downstream 10.0kb downstream 13201 true Scaffold10304: 22005-35205 Arabidopsis halleri
Araha.10304s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold10304: 25206-35205 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362348 5261 Brassicaceae View MSA
123798352 5264 Brassicales-Malvales View MSA
124296002 5266 SBM View MSA
124247870 5268 Malvidae View MSA
124060607 5270 Rosid View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain