Gene : Araha.5348s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR31321:SF17 - PECTINESTERASE 53-RELATED Genomic Order:  1
Name:  ? Araha.5348s0001 Secondary Identifier:  ? PAC:28850428
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5348s0001 0.5kb upstream 0.5kb upstream 3461 true Scaffold5348: 1939-5399 Arabidopsis halleri
Araha.5348s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5348: 1939-2438 Arabidopsis halleri
Araha.5348s0001 0.5kb downstream 0.5kb downstream 3461 true Scaffold5348: 2439-5899 Arabidopsis halleri
Araha.5348s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5348: 5400-5899 Arabidopsis halleri
Araha.5348s0001 1.0kb upstream 1.0kb upstream 3961 true Scaffold5348: 1439-5399 Arabidopsis halleri
Araha.5348s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5348: 1439-2438 Arabidopsis halleri
Araha.5348s0001 1.0kb downstream 1.0kb downstream 3961 true Scaffold5348: 2439-6399 Arabidopsis halleri
Araha.5348s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5348: 5400-6399 Arabidopsis halleri
Araha.5348s0001 2.0kb upstream 2.0kb upstream 4961 true Scaffold5348: 439-5399 Arabidopsis halleri
Araha.5348s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5348: 439-2438 Arabidopsis halleri
Araha.5348s0001 2.0kb downstream 2.0kb downstream 4961 true Scaffold5348: 2439-7399 Arabidopsis halleri
Araha.5348s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5348: 5400-7399 Arabidopsis halleri
Araha.5348s0001 5.0kb upstream 5.0kb upstream 5399 true Scaffold5348: 1-5399 Arabidopsis halleri
Araha.5348s0001 5.0kb upstream 5.0kb upstream 2438 false Scaffold5348: 1-2438 Arabidopsis halleri
Araha.5348s0001 5.0kb downstream 5.0kb downstream 7961 true Scaffold5348: 2439-10399 Arabidopsis halleri
Araha.5348s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5348: 5400-10399 Arabidopsis halleri
Araha.5348s0001 10.0kb upstream 10.0kb upstream 5399 true Scaffold5348: 1-5399 Arabidopsis halleri
Araha.5348s0001 10.0kb upstream 10.0kb upstream 2438 false Scaffold5348: 1-2438 Arabidopsis halleri
Araha.5348s0001 10.0kb downstream 10.0kb downstream 12961 true Scaffold5348: 2439-15399 Arabidopsis halleri
Araha.5348s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5348: 5400-15399 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373168 5261 Brassicaceae View MSA
123835653 5264 Brassicales-Malvales View MSA
124350077 5266 SBM View MSA
124237911 5268 Malvidae View MSA
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain