Gene : Araha.5365s0004 A. halleri v1.1

Defline:  (1 of 2) PTHR34777:SF1 - VQ MOTIF-CONTAINING PROTEIN Genomic Order:  4
Name:  ? Araha.5365s0004 Secondary Identifier:  ? PAC:28841103

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5365s0004 0.5kb upstream 0.5kb upstream 1160 true Scaffold5365: 9731-10890 Arabidopsis halleri
Araha.5365s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5365: 10391-10890 Arabidopsis halleri
Araha.5365s0004 0.5kb downstream 0.5kb downstream 1160 true Scaffold5365: 9231-10390 Arabidopsis halleri
Araha.5365s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5365: 9231-9730 Arabidopsis halleri
Araha.5365s0004 1.0kb upstream 1.0kb upstream 1660 true Scaffold5365: 9731-11390 Arabidopsis halleri
Araha.5365s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5365: 10391-11390 Arabidopsis halleri
Araha.5365s0004 1.0kb downstream 1.0kb downstream 1660 true Scaffold5365: 8731-10390 Arabidopsis halleri
Araha.5365s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5365: 8731-9730 Arabidopsis halleri
Araha.5365s0004 2.0kb upstream 2.0kb upstream 2660 true Scaffold5365: 9731-12390 Arabidopsis halleri
Araha.5365s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5365: 10391-12390 Arabidopsis halleri
Araha.5365s0004 2.0kb downstream 2.0kb downstream 2660 true Scaffold5365: 7731-10390 Arabidopsis halleri
Araha.5365s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5365: 7731-9730 Arabidopsis halleri
Araha.5365s0004 5.0kb upstream 5.0kb upstream 5660 true Scaffold5365: 9731-15390 Arabidopsis halleri
Araha.5365s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5365: 10391-15390 Arabidopsis halleri
Araha.5365s0004 5.0kb downstream 5.0kb downstream 5660 true Scaffold5365: 4731-10390 Arabidopsis halleri
Araha.5365s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5365: 4731-9730 Arabidopsis halleri
Araha.5365s0004 10.0kb upstream 10.0kb upstream 10660 true Scaffold5365: 9731-20390 Arabidopsis halleri
Araha.5365s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5365: 10391-20390 Arabidopsis halleri
Araha.5365s0004 10.0kb downstream 10.0kb downstream 10390 true Scaffold5365: 1-10390 Arabidopsis halleri
Araha.5365s0004 10.0kb downstream 10.0kb downstream 9730 false Scaffold5365: 1-9730 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026461 5273 Angiosperm View MSA
122379980 5261 Brassicaceae View MSA
123840624 5264 Brassicales-Malvales View MSA
124342218 5266 SBM View MSA
124240018 5268 Malvidae View MSA
124050155 5270 Rosid View MSA
123744131 5271 Pentapetalae View MSA
122770912 5272 Eudicot View MSA
121296343 5274 Embryophyte View MSA
123334522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain