Gene : Araha.10310s0004 A. halleri v1.1
Defline:  (1 of 1) PTHR21256:SF2 - HISTIDINE BIOSYNTHESIS TRIFUNCTIONAL PROTEIN Genomic Order:  4
Name:  ? Araha.10310s0004 Secondary Identifier:  ? PAC:28854470
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri HISTSYN-PWY Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10310s0004 0.5kb upstream 0.5kb upstream 3137 true Scaffold10310: 13506-16642 Arabidopsis halleri
Araha.10310s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold10310: 16143-16642 Arabidopsis halleri
Araha.10310s0004 0.5kb downstream 0.5kb downstream 3137 true Scaffold10310: 13006-16142 Arabidopsis halleri
Araha.10310s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold10310: 13006-13505 Arabidopsis halleri
Araha.10310s0004 1.0kb upstream 1.0kb upstream 3637 true Scaffold10310: 13506-17142 Arabidopsis halleri
Araha.10310s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold10310: 16143-17142 Arabidopsis halleri
Araha.10310s0004 1.0kb downstream 1.0kb downstream 3637 true Scaffold10310: 12506-16142 Arabidopsis halleri
Araha.10310s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold10310: 12506-13505 Arabidopsis halleri
Araha.10310s0004 2.0kb upstream 2.0kb upstream 4637 true Scaffold10310: 13506-18142 Arabidopsis halleri
Araha.10310s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold10310: 16143-18142 Arabidopsis halleri
Araha.10310s0004 2.0kb downstream 2.0kb downstream 4637 true Scaffold10310: 11506-16142 Arabidopsis halleri
Araha.10310s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold10310: 11506-13505 Arabidopsis halleri
Araha.10310s0004 5.0kb upstream 5.0kb upstream 7637 true Scaffold10310: 13506-21142 Arabidopsis halleri
Araha.10310s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold10310: 16143-21142 Arabidopsis halleri
Araha.10310s0004 5.0kb downstream 5.0kb downstream 7637 true Scaffold10310: 8506-16142 Arabidopsis halleri
Araha.10310s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold10310: 8506-13505 Arabidopsis halleri
Araha.10310s0004 10.0kb upstream 10.0kb upstream 12637 true Scaffold10310: 13506-26142 Arabidopsis halleri
Araha.10310s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold10310: 16143-26142 Arabidopsis halleri
Araha.10310s0004 10.0kb downstream 10.0kb downstream 12637 true Scaffold10310: 3506-16142 Arabidopsis halleri
Araha.10310s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold10310: 3506-13505 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369392 5261 Brassicaceae View MSA
123839930 5264 Brassicales-Malvales View MSA
124340813 5266 SBM View MSA
124241188 5268 Malvidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain