Gene : Araha.5366s0010 A. halleri v1.1

Defline:  (1 of 20) PTHR23081 - RNA POLYMERASE II CTD PHOSPHATASE Genomic Order:  10
Name:  ? Araha.5366s0010 Secondary Identifier:  ? PAC:28845157

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5366s0010 0.5kb upstream 0.5kb upstream 1445 true Scaffold5366: 36387-37831 Arabidopsis halleri
Araha.5366s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold5366: 37332-37831 Arabidopsis halleri
Araha.5366s0010 0.5kb downstream 0.5kb downstream 1445 true Scaffold5366: 35887-37331 Arabidopsis halleri
Araha.5366s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold5366: 35887-36386 Arabidopsis halleri
Araha.5366s0010 1.0kb upstream 1.0kb upstream 1945 true Scaffold5366: 36387-38331 Arabidopsis halleri
Araha.5366s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold5366: 37332-38331 Arabidopsis halleri
Araha.5366s0010 1.0kb downstream 1.0kb downstream 1945 true Scaffold5366: 35387-37331 Arabidopsis halleri
Araha.5366s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold5366: 35387-36386 Arabidopsis halleri
Araha.5366s0010 2.0kb upstream 2.0kb upstream 2945 true Scaffold5366: 36387-39331 Arabidopsis halleri
Araha.5366s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold5366: 37332-39331 Arabidopsis halleri
Araha.5366s0010 2.0kb downstream 2.0kb downstream 2945 true Scaffold5366: 34387-37331 Arabidopsis halleri
Araha.5366s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold5366: 34387-36386 Arabidopsis halleri
Araha.5366s0010 5.0kb upstream 5.0kb upstream 5945 true Scaffold5366: 36387-42331 Arabidopsis halleri
Araha.5366s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold5366: 37332-42331 Arabidopsis halleri
Araha.5366s0010 5.0kb downstream 5.0kb downstream 5945 true Scaffold5366: 31387-37331 Arabidopsis halleri
Araha.5366s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold5366: 31387-36386 Arabidopsis halleri
Araha.5366s0010 10.0kb upstream 10.0kb upstream 10945 true Scaffold5366: 36387-47331 Arabidopsis halleri
Araha.5366s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold5366: 37332-47331 Arabidopsis halleri
Araha.5366s0010 10.0kb downstream 10.0kb downstream 10945 true Scaffold5366: 26387-37331 Arabidopsis halleri
Araha.5366s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold5366: 26387-36386 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502833 5273 Angiosperm View MSA
122343769 5261 Brassicaceae View MSA
123783873 5264 Brassicales-Malvales View MSA
124282083 5266 SBM View MSA
124136736 5268 Malvidae View MSA
123864543 5270 Rosid View MSA
123449845 5271 Pentapetalae View MSA
122485374 5272 Eudicot View MSA
120776130 5274 Embryophyte View MSA
122818414 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain