Gene : Araha.5280s0002 A. halleri v1.1
Defline:  (1 of 1) PF02992//PF13963 - Transposase family tnp2 (Transposase_21) // Transposase-associated domain (Transpos_assoc) Genomic Order:  2
Name:  ? Araha.5280s0002 Secondary Identifier:  ? PAC:28842858
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5280s0002 0.5kb upstream 0.5kb upstream 1498 true Scaffold5280: 9531-11028 Arabidopsis halleri
Araha.5280s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5280: 10529-11028 Arabidopsis halleri
Araha.5280s0002 0.5kb downstream 0.5kb downstream 1498 true Scaffold5280: 9031-10528 Arabidopsis halleri
Araha.5280s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5280: 9031-9530 Arabidopsis halleri
Araha.5280s0002 1.0kb upstream 1.0kb upstream 1998 true Scaffold5280: 9531-11528 Arabidopsis halleri
Araha.5280s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5280: 10529-11528 Arabidopsis halleri
Araha.5280s0002 1.0kb downstream 1.0kb downstream 1998 true Scaffold5280: 8531-10528 Arabidopsis halleri
Araha.5280s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5280: 8531-9530 Arabidopsis halleri
Araha.5280s0002 2.0kb upstream 2.0kb upstream 2998 true Scaffold5280: 9531-12528 Arabidopsis halleri
Araha.5280s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5280: 10529-12528 Arabidopsis halleri
Araha.5280s0002 2.0kb downstream 2.0kb downstream 2998 true Scaffold5280: 7531-10528 Arabidopsis halleri
Araha.5280s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5280: 7531-9530 Arabidopsis halleri
Araha.5280s0002 5.0kb upstream 5.0kb upstream 5998 true Scaffold5280: 9531-15528 Arabidopsis halleri
Araha.5280s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5280: 10529-15528 Arabidopsis halleri
Araha.5280s0002 5.0kb downstream 5.0kb downstream 5998 true Scaffold5280: 4531-10528 Arabidopsis halleri
Araha.5280s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5280: 4531-9530 Arabidopsis halleri
Araha.5280s0002 10.0kb upstream 10.0kb upstream 10998 true Scaffold5280: 9531-20528 Arabidopsis halleri
Araha.5280s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5280: 10529-20528 Arabidopsis halleri
Araha.5280s0002 10.0kb downstream 10.0kb downstream 10528 true Scaffold5280: 1-10528 Arabidopsis halleri
Araha.5280s0002 10.0kb downstream 10.0kb downstream 9530 false Scaffold5280: 1-9530 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121484219 5273 Angiosperm Singleton cluster - no MSA
122317934 5261 Brassicaceae Singleton cluster - no MSA
123759534 5264 Brassicales-Malvales Singleton cluster - no MSA
124258169 5266 SBM Singleton cluster - no MSA
124114792 5268 Malvidae Singleton cluster - no MSA
123844184 5270 Rosid Singleton cluster - no MSA
123430467 5271 Pentapetalae Singleton cluster - no MSA
122466088 5272 Eudicot Singleton cluster - no MSA
120757614 5274 Embryophyte Singleton cluster - no MSA
122800074 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain