Gene : Araha.10017s0006 A. halleri v1.1
Defline:  (1 of 1) PTHR24067//PTHR24067:SF112 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  6
Name:  ? Araha.10017s0006 Secondary Identifier:  ? PAC:28848885
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7511 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10017s0006 0.5kb upstream 0.5kb upstream 2102 true Scaffold10017: 18321-20422 Arabidopsis halleri
Araha.10017s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold10017: 18321-18820 Arabidopsis halleri
Araha.10017s0006 0.5kb downstream 0.5kb downstream 2102 true Scaffold10017: 18821-20922 Arabidopsis halleri
Araha.10017s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold10017: 20423-20922 Arabidopsis halleri
Araha.10017s0006 1.0kb upstream 1.0kb upstream 2602 true Scaffold10017: 17821-20422 Arabidopsis halleri
Araha.10017s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold10017: 17821-18820 Arabidopsis halleri
Araha.10017s0006 1.0kb downstream 1.0kb downstream 2602 true Scaffold10017: 18821-21422 Arabidopsis halleri
Araha.10017s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold10017: 20423-21422 Arabidopsis halleri
Araha.10017s0006 2.0kb upstream 2.0kb upstream 3602 true Scaffold10017: 16821-20422 Arabidopsis halleri
Araha.10017s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold10017: 16821-18820 Arabidopsis halleri
Araha.10017s0006 2.0kb downstream 2.0kb downstream 3602 true Scaffold10017: 18821-22422 Arabidopsis halleri
Araha.10017s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold10017: 20423-22422 Arabidopsis halleri
Araha.10017s0006 5.0kb upstream 5.0kb upstream 6602 true Scaffold10017: 13821-20422 Arabidopsis halleri
Araha.10017s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold10017: 13821-18820 Arabidopsis halleri
Araha.10017s0006 5.0kb downstream 5.0kb downstream 6602 true Scaffold10017: 18821-25422 Arabidopsis halleri
Araha.10017s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold10017: 20423-25422 Arabidopsis halleri
Araha.10017s0006 10.0kb upstream 10.0kb upstream 11602 true Scaffold10017: 8821-20422 Arabidopsis halleri
Araha.10017s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold10017: 8821-18820 Arabidopsis halleri
Araha.10017s0006 10.0kb downstream 10.0kb downstream 11602 true Scaffold10017: 18821-30422 Arabidopsis halleri
Araha.10017s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold10017: 20423-30422 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375381 5261 Brassicaceae View MSA
123839488 5264 Brassicales-Malvales View MSA
124344755 5266 SBM View MSA
124236998 5268 Malvidae View MSA
124074734 5270 Rosid View MSA
123752891 5271 Pentapetalae View MSA
122794655 5272 Eudicot View MSA
122047112 5273 Angiosperm View MSA
121344973 5274 Embryophyte View MSA
123425853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain