Gene : Araha.10017s0004 A. halleri v1.1

Defline:  (1 of 2) PTHR16052:SF0 - TBCC DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  4
Name:  ? Araha.10017s0004 Secondary Identifier:  ? PAC:28848887

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10017s0004 0.5kb upstream 0.5kb upstream 4579 true Scaffold10017: 6821-11399 Arabidopsis halleri
Araha.10017s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold10017: 10900-11399 Arabidopsis halleri
Araha.10017s0004 0.5kb downstream 0.5kb downstream 4579 true Scaffold10017: 6321-10899 Arabidopsis halleri
Araha.10017s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold10017: 6321-6820 Arabidopsis halleri
Araha.10017s0004 1.0kb upstream 1.0kb upstream 5079 true Scaffold10017: 6821-11899 Arabidopsis halleri
Araha.10017s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold10017: 10900-11899 Arabidopsis halleri
Araha.10017s0004 1.0kb downstream 1.0kb downstream 5079 true Scaffold10017: 5821-10899 Arabidopsis halleri
Araha.10017s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold10017: 5821-6820 Arabidopsis halleri
Araha.10017s0004 2.0kb upstream 2.0kb upstream 6079 true Scaffold10017: 6821-12899 Arabidopsis halleri
Araha.10017s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold10017: 10900-12899 Arabidopsis halleri
Araha.10017s0004 2.0kb downstream 2.0kb downstream 6079 true Scaffold10017: 4821-10899 Arabidopsis halleri
Araha.10017s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold10017: 4821-6820 Arabidopsis halleri
Araha.10017s0004 5.0kb upstream 5.0kb upstream 9079 true Scaffold10017: 6821-15899 Arabidopsis halleri
Araha.10017s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold10017: 10900-15899 Arabidopsis halleri
Araha.10017s0004 5.0kb downstream 5.0kb downstream 9079 true Scaffold10017: 1821-10899 Arabidopsis halleri
Araha.10017s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold10017: 1821-6820 Arabidopsis halleri
Araha.10017s0004 10.0kb upstream 10.0kb upstream 14079 true Scaffold10017: 6821-20899 Arabidopsis halleri
Araha.10017s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold10017: 10900-20899 Arabidopsis halleri
Araha.10017s0004 10.0kb downstream 10.0kb downstream 10899 true Scaffold10017: 1-10899 Arabidopsis halleri
Araha.10017s0004 10.0kb downstream 10.0kb downstream 6820 false Scaffold10017: 1-6820 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365125 5261 Brassicaceae View MSA
123839772 5264 Brassicales-Malvales View MSA
124338624 5266 SBM View MSA
124247870 5268 Malvidae View MSA
124060607 5270 Rosid View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain