Gene : Araha.10139s0005 A. halleri v1.1

Defline:  (1 of 1) PTHR17204:SF18 - PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  5
Name:  ? Araha.10139s0005 Secondary Identifier:  ? PAC:28845466

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10139s0005 0.5kb upstream 0.5kb upstream 5194 true Scaffold10139: 15554-20747 Arabidopsis halleri
Araha.10139s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold10139: 20248-20747 Arabidopsis halleri
Araha.10139s0005 0.5kb downstream 0.5kb downstream 5194 true Scaffold10139: 15054-20247 Arabidopsis halleri
Araha.10139s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold10139: 15054-15553 Arabidopsis halleri
Araha.10139s0005 1.0kb upstream 1.0kb upstream 5694 true Scaffold10139: 15554-21247 Arabidopsis halleri
Araha.10139s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold10139: 20248-21247 Arabidopsis halleri
Araha.10139s0005 1.0kb downstream 1.0kb downstream 5694 true Scaffold10139: 14554-20247 Arabidopsis halleri
Araha.10139s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold10139: 14554-15553 Arabidopsis halleri
Araha.10139s0005 2.0kb upstream 2.0kb upstream 6694 true Scaffold10139: 15554-22247 Arabidopsis halleri
Araha.10139s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold10139: 20248-22247 Arabidopsis halleri
Araha.10139s0005 2.0kb downstream 2.0kb downstream 6694 true Scaffold10139: 13554-20247 Arabidopsis halleri
Araha.10139s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold10139: 13554-15553 Arabidopsis halleri
Araha.10139s0005 5.0kb upstream 5.0kb upstream 9694 true Scaffold10139: 15554-25247 Arabidopsis halleri
Araha.10139s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold10139: 20248-25247 Arabidopsis halleri
Araha.10139s0005 5.0kb downstream 5.0kb downstream 9694 true Scaffold10139: 10554-20247 Arabidopsis halleri
Araha.10139s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold10139: 10554-15553 Arabidopsis halleri
Araha.10139s0005 10.0kb upstream 10.0kb upstream 14694 true Scaffold10139: 15554-30247 Arabidopsis halleri
Araha.10139s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold10139: 20248-30247 Arabidopsis halleri
Araha.10139s0005 10.0kb downstream 10.0kb downstream 14694 true Scaffold10139: 5554-20247 Arabidopsis halleri
Araha.10139s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold10139: 5554-15553 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363665 5261 Brassicaceae View MSA
123829363 5264 Brassicales-Malvales View MSA
124338828 5266 SBM View MSA
124244228 5268 Malvidae View MSA
124069199 5270 Rosid View MSA
123753236 5271 Pentapetalae View MSA
122790404 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain