Gene : Araha.5264s0001 A. halleri v1.1
Defline:  (1 of 4) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  1
Name:  ? Araha.5264s0001 Secondary Identifier:  ? PAC:28858656
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri GLYOXYLATE-BYPASS Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-561 Arabidopsis halleri pathologic  
Ahalleri PWY-5690 Arabidopsis halleri pathologic  
Ahalleri PWY-6549 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5264s0001 0.5kb upstream 0.5kb upstream 5612 true Scaffold5264: 23092-28703 Arabidopsis halleri
Araha.5264s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5264: 28204-28703 Arabidopsis halleri
Araha.5264s0001 0.5kb downstream 0.5kb downstream 5612 true Scaffold5264: 22592-28203 Arabidopsis halleri
Araha.5264s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5264: 22592-23091 Arabidopsis halleri
Araha.5264s0001 1.0kb upstream 1.0kb upstream 6112 true Scaffold5264: 23092-29203 Arabidopsis halleri
Araha.5264s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5264: 28204-29203 Arabidopsis halleri
Araha.5264s0001 1.0kb downstream 1.0kb downstream 6112 true Scaffold5264: 22092-28203 Arabidopsis halleri
Araha.5264s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5264: 22092-23091 Arabidopsis halleri
Araha.5264s0001 2.0kb upstream 2.0kb upstream 7112 true Scaffold5264: 23092-30203 Arabidopsis halleri
Araha.5264s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5264: 28204-30203 Arabidopsis halleri
Araha.5264s0001 2.0kb downstream 2.0kb downstream 7112 true Scaffold5264: 21092-28203 Arabidopsis halleri
Araha.5264s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5264: 21092-23091 Arabidopsis halleri
Araha.5264s0001 5.0kb upstream 5.0kb upstream 10112 true Scaffold5264: 23092-33203 Arabidopsis halleri
Araha.5264s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5264: 28204-33203 Arabidopsis halleri
Araha.5264s0001 5.0kb downstream 5.0kb downstream 10112 true Scaffold5264: 18092-28203 Arabidopsis halleri
Araha.5264s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5264: 18092-23091 Arabidopsis halleri
Araha.5264s0001 10.0kb upstream 10.0kb upstream 14604 true Scaffold5264: 23092-37695 Arabidopsis halleri
Araha.5264s0001 10.0kb upstream 10.0kb upstream 9492 false Scaffold5264: 28204-37695 Arabidopsis halleri
Araha.5264s0001 10.0kb downstream 10.0kb downstream 15112 true Scaffold5264: 13092-28203 Arabidopsis halleri
Araha.5264s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5264: 13092-23091 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327774 5261 Brassicaceae View MSA
123769176 5264 Brassicales-Malvales View MSA
124267748 5266 SBM View MSA
124124037 5268 Malvidae View MSA
123853118 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain