Gene : Araha.5271s0002 A. halleri v1.1

Defline:  (1 of 1) PF14770 - Transmembrane protein 18 (TMEM18) Genomic Order:  2
Name:  ? Araha.5271s0002 Secondary Identifier:  ? PAC:28849538

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5271s0002 0.5kb upstream 0.5kb upstream 1381 true Scaffold5271: 4192-5572 Arabidopsis halleri
Araha.5271s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5271: 4192-4691 Arabidopsis halleri
Araha.5271s0002 0.5kb downstream 0.5kb downstream 1381 true Scaffold5271: 4692-6072 Arabidopsis halleri
Araha.5271s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5271: 5573-6072 Arabidopsis halleri
Araha.5271s0002 1.0kb upstream 1.0kb upstream 1881 true Scaffold5271: 3692-5572 Arabidopsis halleri
Araha.5271s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5271: 3692-4691 Arabidopsis halleri
Araha.5271s0002 1.0kb downstream 1.0kb downstream 1881 true Scaffold5271: 4692-6572 Arabidopsis halleri
Araha.5271s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5271: 5573-6572 Arabidopsis halleri
Araha.5271s0002 2.0kb upstream 2.0kb upstream 2881 true Scaffold5271: 2692-5572 Arabidopsis halleri
Araha.5271s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5271: 2692-4691 Arabidopsis halleri
Araha.5271s0002 2.0kb downstream 2.0kb downstream 2881 true Scaffold5271: 4692-7572 Arabidopsis halleri
Araha.5271s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5271: 5573-7572 Arabidopsis halleri
Araha.5271s0002 5.0kb upstream 5.0kb upstream 5572 true Scaffold5271: 1-5572 Arabidopsis halleri
Araha.5271s0002 5.0kb upstream 5.0kb upstream 4691 false Scaffold5271: 1-4691 Arabidopsis halleri
Araha.5271s0002 5.0kb downstream 5.0kb downstream 5881 true Scaffold5271: 4692-10572 Arabidopsis halleri
Araha.5271s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5271: 5573-10572 Arabidopsis halleri
Araha.5271s0002 10.0kb upstream 10.0kb upstream 5572 true Scaffold5271: 1-5572 Arabidopsis halleri
Araha.5271s0002 10.0kb upstream 10.0kb upstream 4691 false Scaffold5271: 1-4691 Arabidopsis halleri
Araha.5271s0002 10.0kb downstream 10.0kb downstream 10881 true Scaffold5271: 4692-15572 Arabidopsis halleri
Araha.5271s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold5271: 5573-15572 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121485441 5273 Angiosperm Singleton cluster - no MSA
122319159 5261 Brassicaceae Singleton cluster - no MSA
123760759 5264 Brassicales-Malvales Singleton cluster - no MSA
124259394 5266 SBM Singleton cluster - no MSA
124116016 5268 Malvidae Singleton cluster - no MSA
123845408 5270 Rosid Singleton cluster - no MSA
123431689 5271 Pentapetalae Singleton cluster - no MSA
122467310 5272 Eudicot Singleton cluster - no MSA
120758835 5274 Embryophyte Singleton cluster - no MSA
122801295 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain