Gene : Araha.5540s0002 A. halleri v1.1

Defline:  (1 of 26) PF05498 - Rapid ALkalinization Factor (RALF) (RALF) Genomic Order:  2
Name:  ? Araha.5540s0002 Secondary Identifier:  ? PAC:28859010

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5540s0002 0.5kb upstream 0.5kb upstream 764 true Scaffold5540: 4477-5240 Arabidopsis halleri
Araha.5540s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5540: 4477-4976 Arabidopsis halleri
Araha.5540s0002 0.5kb downstream 0.5kb downstream 764 true Scaffold5540: 4977-5740 Arabidopsis halleri
Araha.5540s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5540: 5241-5740 Arabidopsis halleri
Araha.5540s0002 1.0kb upstream 1.0kb upstream 1264 true Scaffold5540: 3977-5240 Arabidopsis halleri
Araha.5540s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5540: 3977-4976 Arabidopsis halleri
Araha.5540s0002 1.0kb downstream 1.0kb downstream 1264 true Scaffold5540: 4977-6240 Arabidopsis halleri
Araha.5540s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5540: 5241-6240 Arabidopsis halleri
Araha.5540s0002 2.0kb upstream 2.0kb upstream 2264 true Scaffold5540: 2977-5240 Arabidopsis halleri
Araha.5540s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5540: 2977-4976 Arabidopsis halleri
Araha.5540s0002 2.0kb downstream 2.0kb downstream 2264 true Scaffold5540: 4977-7240 Arabidopsis halleri
Araha.5540s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5540: 5241-7240 Arabidopsis halleri
Araha.5540s0002 5.0kb upstream 5.0kb upstream 5240 true Scaffold5540: 1-5240 Arabidopsis halleri
Araha.5540s0002 5.0kb upstream 5.0kb upstream 4976 false Scaffold5540: 1-4976 Arabidopsis halleri
Araha.5540s0002 5.0kb downstream 5.0kb downstream 5264 true Scaffold5540: 4977-10240 Arabidopsis halleri
Araha.5540s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold5540: 5241-10240 Arabidopsis halleri
Araha.5540s0002 10.0kb upstream 10.0kb upstream 5240 true Scaffold5540: 1-5240 Arabidopsis halleri
Araha.5540s0002 10.0kb upstream 10.0kb upstream 4976 false Scaffold5540: 1-4976 Arabidopsis halleri
Araha.5540s0002 10.0kb downstream 10.0kb downstream 10264 true Scaffold5540: 4977-15240 Arabidopsis halleri
Araha.5540s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold5540: 5241-15240 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792188 5273 Angiosperm View MSA
122381419 5261 Brassicaceae View MSA
123803235 5264 Brassicales-Malvales View MSA
124300360 5266 SBM View MSA
124151558 5268 Malvidae View MSA
123876963 5270 Rosid View MSA
123460562 5271 Pentapetalae View MSA
122796858 5272 Eudicot View MSA
121063434 5274 Embryophyte View MSA
123103183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain