Gene : Araha.5579s0002 A. halleri v1.1
Defline:  (1 of 4) PTHR13697:SF7 - 6-PHOSPHOFRUCTOKINASE 1-RELATED Genomic Order:  2
Name:  ? Araha.5579s0002 Secondary Identifier:  ? PAC:28857639
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-1042 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5579s0002 0.5kb upstream 0.5kb upstream 3488 true Scaffold5579: 4361-7848 Arabidopsis halleri
Araha.5579s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold5579: 7349-7848 Arabidopsis halleri
Araha.5579s0002 0.5kb downstream 0.5kb downstream 3488 true Scaffold5579: 3861-7348 Arabidopsis halleri
Araha.5579s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold5579: 3861-4360 Arabidopsis halleri
Araha.5579s0002 1.0kb upstream 1.0kb upstream 3988 true Scaffold5579: 4361-8348 Arabidopsis halleri
Araha.5579s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold5579: 7349-8348 Arabidopsis halleri
Araha.5579s0002 1.0kb downstream 1.0kb downstream 3988 true Scaffold5579: 3361-7348 Arabidopsis halleri
Araha.5579s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold5579: 3361-4360 Arabidopsis halleri
Araha.5579s0002 2.0kb upstream 2.0kb upstream 4988 true Scaffold5579: 4361-9348 Arabidopsis halleri
Araha.5579s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold5579: 7349-9348 Arabidopsis halleri
Araha.5579s0002 2.0kb downstream 2.0kb downstream 4988 true Scaffold5579: 2361-7348 Arabidopsis halleri
Araha.5579s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold5579: 2361-4360 Arabidopsis halleri
Araha.5579s0002 5.0kb upstream 5.0kb upstream 7988 true Scaffold5579: 4361-12348 Arabidopsis halleri
Araha.5579s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold5579: 7349-12348 Arabidopsis halleri
Araha.5579s0002 5.0kb downstream 5.0kb downstream 7348 true Scaffold5579: 1-7348 Arabidopsis halleri
Araha.5579s0002 5.0kb downstream 5.0kb downstream 4360 false Scaffold5579: 1-4360 Arabidopsis halleri
Araha.5579s0002 10.0kb upstream 10.0kb upstream 12988 true Scaffold5579: 4361-17348 Arabidopsis halleri
Araha.5579s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold5579: 7349-17348 Arabidopsis halleri
Araha.5579s0002 10.0kb downstream 10.0kb downstream 7348 true Scaffold5579: 1-7348 Arabidopsis halleri
Araha.5579s0002 10.0kb downstream 10.0kb downstream 4360 false Scaffold5579: 1-4360 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122363993 5261 Brassicaceae View MSA
123798663 5264 Brassicales-Malvales View MSA
124296271 5266 SBM View MSA
124148474 5268 Malvidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain