Gene : Araha.10844s0002 A. halleri v1.1
Defline:  (1 of 2) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  2
Name:  ? Araha.10844s0002 Secondary Identifier:  ? PAC:28852494
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri CYSTSYN-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-6936 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10844s0002 0.5kb upstream 0.5kb upstream 1537 true Scaffold10844: 14233-15769 Arabidopsis halleri
Araha.10844s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold10844: 15270-15769 Arabidopsis halleri
Araha.10844s0002 0.5kb downstream 0.5kb downstream 1537 true Scaffold10844: 13733-15269 Arabidopsis halleri
Araha.10844s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold10844: 13733-14232 Arabidopsis halleri
Araha.10844s0002 1.0kb upstream 1.0kb upstream 1543 true Scaffold10844: 14233-15775 Arabidopsis halleri
Araha.10844s0002 1.0kb upstream 1.0kb upstream 506 false Scaffold10844: 15270-15775 Arabidopsis halleri
Araha.10844s0002 1.0kb downstream 1.0kb downstream 2037 true Scaffold10844: 13233-15269 Arabidopsis halleri
Araha.10844s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold10844: 13233-14232 Arabidopsis halleri
Araha.10844s0002 2.0kb upstream 2.0kb upstream 1543 true Scaffold10844: 14233-15775 Arabidopsis halleri
Araha.10844s0002 2.0kb upstream 2.0kb upstream 506 false Scaffold10844: 15270-15775 Arabidopsis halleri
Araha.10844s0002 2.0kb downstream 2.0kb downstream 3037 true Scaffold10844: 12233-15269 Arabidopsis halleri
Araha.10844s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold10844: 12233-14232 Arabidopsis halleri
Araha.10844s0002 5.0kb upstream 5.0kb upstream 1543 true Scaffold10844: 14233-15775 Arabidopsis halleri
Araha.10844s0002 5.0kb upstream 5.0kb upstream 506 false Scaffold10844: 15270-15775 Arabidopsis halleri
Araha.10844s0002 5.0kb downstream 5.0kb downstream 6037 true Scaffold10844: 9233-15269 Arabidopsis halleri
Araha.10844s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold10844: 9233-14232 Arabidopsis halleri
Araha.10844s0002 10.0kb upstream 10.0kb upstream 1543 true Scaffold10844: 14233-15775 Arabidopsis halleri
Araha.10844s0002 10.0kb upstream 10.0kb upstream 506 false Scaffold10844: 15270-15775 Arabidopsis halleri
Araha.10844s0002 10.0kb downstream 10.0kb downstream 11037 true Scaffold10844: 4233-15269 Arabidopsis halleri
Araha.10844s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold10844: 4233-14232 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361676 5261 Brassicaceae View MSA
123798221 5264 Brassicales-Malvales View MSA
124295891 5266 SBM View MSA
124148202 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain