Gene : Araha.5526s0001 A. halleri v1.1

Defline:  (1 of 3) PTHR20889 - PHOSPHATASE, ORPHAN 1, 2 Genomic Order:  1
Name:  ? Araha.5526s0001 Secondary Identifier:  ? PAC:28840604

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5526s0001 0.5kb upstream 0.5kb upstream 2102 true Scaffold5526: 339-2440 Arabidopsis halleri
Araha.5526s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5526: 339-838 Arabidopsis halleri
Araha.5526s0001 0.5kb downstream 0.5kb downstream 2102 true Scaffold5526: 839-2940 Arabidopsis halleri
Araha.5526s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5526: 2441-2940 Arabidopsis halleri
Araha.5526s0001 1.0kb upstream 1.0kb upstream 2440 true Scaffold5526: 1-2440 Arabidopsis halleri
Araha.5526s0001 1.0kb upstream 1.0kb upstream 838 false Scaffold5526: 1-838 Arabidopsis halleri
Araha.5526s0001 1.0kb downstream 1.0kb downstream 2602 true Scaffold5526: 839-3440 Arabidopsis halleri
Araha.5526s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5526: 2441-3440 Arabidopsis halleri
Araha.5526s0001 2.0kb upstream 2.0kb upstream 2440 true Scaffold5526: 1-2440 Arabidopsis halleri
Araha.5526s0001 2.0kb upstream 2.0kb upstream 838 false Scaffold5526: 1-838 Arabidopsis halleri
Araha.5526s0001 2.0kb downstream 2.0kb downstream 3602 true Scaffold5526: 839-4440 Arabidopsis halleri
Araha.5526s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5526: 2441-4440 Arabidopsis halleri
Araha.5526s0001 5.0kb upstream 5.0kb upstream 2440 true Scaffold5526: 1-2440 Arabidopsis halleri
Araha.5526s0001 5.0kb upstream 5.0kb upstream 838 false Scaffold5526: 1-838 Arabidopsis halleri
Araha.5526s0001 5.0kb downstream 5.0kb downstream 6602 true Scaffold5526: 839-7440 Arabidopsis halleri
Araha.5526s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5526: 2441-7440 Arabidopsis halleri
Araha.5526s0001 10.0kb upstream 10.0kb upstream 2440 true Scaffold5526: 1-2440 Arabidopsis halleri
Araha.5526s0001 10.0kb upstream 10.0kb upstream 838 false Scaffold5526: 1-838 Arabidopsis halleri
Araha.5526s0001 10.0kb downstream 10.0kb downstream 11602 true Scaffold5526: 839-12440 Arabidopsis halleri
Araha.5526s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold5526: 2441-12440 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041363 5273 Angiosperm View MSA
122372933 5261 Brassicaceae View MSA
123837270 5264 Brassicales-Malvales View MSA
124351275 5266 SBM View MSA
124249478 5268 Malvidae View MSA
124071983 5270 Rosid View MSA
123744582 5271 Pentapetalae View MSA
122796230 5272 Eudicot View MSA
121350912 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain