Gene : Araha.10536s0002 A. halleri v1.1

Defline:  (1 of 8) 1.6.5.9 - NADH:ubiquinone reductase (non-electrogenic) / Ubiquinone reductase Genomic Order:  2
Name:  ? Araha.10536s0002 Secondary Identifier:  ? PAC:28855206

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-7279 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.10536s0002 0.5kb upstream 0.5kb upstream 3026 true Scaffold10536: 5247-8272 Arabidopsis halleri
Araha.10536s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold10536: 7773-8272 Arabidopsis halleri
Araha.10536s0002 0.5kb downstream 0.5kb downstream 3026 true Scaffold10536: 4747-7772 Arabidopsis halleri
Araha.10536s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold10536: 4747-5246 Arabidopsis halleri
Araha.10536s0002 1.0kb upstream 1.0kb upstream 3526 true Scaffold10536: 5247-8772 Arabidopsis halleri
Araha.10536s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold10536: 7773-8772 Arabidopsis halleri
Araha.10536s0002 1.0kb downstream 1.0kb downstream 3526 true Scaffold10536: 4247-7772 Arabidopsis halleri
Araha.10536s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold10536: 4247-5246 Arabidopsis halleri
Araha.10536s0002 2.0kb upstream 2.0kb upstream 4526 true Scaffold10536: 5247-9772 Arabidopsis halleri
Araha.10536s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold10536: 7773-9772 Arabidopsis halleri
Araha.10536s0002 2.0kb downstream 2.0kb downstream 4526 true Scaffold10536: 3247-7772 Arabidopsis halleri
Araha.10536s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold10536: 3247-5246 Arabidopsis halleri
Araha.10536s0002 5.0kb upstream 5.0kb upstream 7526 true Scaffold10536: 5247-12772 Arabidopsis halleri
Araha.10536s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold10536: 7773-12772 Arabidopsis halleri
Araha.10536s0002 5.0kb downstream 5.0kb downstream 7526 true Scaffold10536: 247-7772 Arabidopsis halleri
Araha.10536s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold10536: 247-5246 Arabidopsis halleri
Araha.10536s0002 10.0kb upstream 10.0kb upstream 8984 true Scaffold10536: 5247-14230 Arabidopsis halleri
Araha.10536s0002 10.0kb upstream 10.0kb upstream 6458 false Scaffold10536: 7773-14230 Arabidopsis halleri
Araha.10536s0002 10.0kb downstream 10.0kb downstream 7772 true Scaffold10536: 1-7772 Arabidopsis halleri
Araha.10536s0002 10.0kb downstream 10.0kb downstream 5246 false Scaffold10536: 1-5246 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375509 5261 Brassicaceae View MSA
123838919 5264 Brassicales-Malvales View MSA
124340078 5266 SBM View MSA
124246164 5268 Malvidae View MSA
124062110 5270 Rosid View MSA
123742437 5271 Pentapetalae View MSA
122794116 5272 Eudicot View MSA
122050116 5273 Angiosperm View MSA
121344067 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain