Gene : Araha.5509s0004 A. halleri v1.1
Defline:  (1 of 5) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  4
Name:  ? Araha.5509s0004 Secondary Identifier:  ? PAC:28846598
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5509s0004 0.5kb upstream 0.5kb upstream 1408 true Scaffold5509: 18642-20049 Arabidopsis halleri
Araha.5509s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold5509: 18642-19141 Arabidopsis halleri
Araha.5509s0004 0.5kb downstream 0.5kb downstream 1408 true Scaffold5509: 19142-20549 Arabidopsis halleri
Araha.5509s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold5509: 20050-20549 Arabidopsis halleri
Araha.5509s0004 1.0kb upstream 1.0kb upstream 1908 true Scaffold5509: 18142-20049 Arabidopsis halleri
Araha.5509s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold5509: 18142-19141 Arabidopsis halleri
Araha.5509s0004 1.0kb downstream 1.0kb downstream 1908 true Scaffold5509: 19142-21049 Arabidopsis halleri
Araha.5509s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold5509: 20050-21049 Arabidopsis halleri
Araha.5509s0004 2.0kb upstream 2.0kb upstream 2908 true Scaffold5509: 17142-20049 Arabidopsis halleri
Araha.5509s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold5509: 17142-19141 Arabidopsis halleri
Araha.5509s0004 2.0kb downstream 2.0kb downstream 2908 true Scaffold5509: 19142-22049 Arabidopsis halleri
Araha.5509s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold5509: 20050-22049 Arabidopsis halleri
Araha.5509s0004 5.0kb upstream 5.0kb upstream 5908 true Scaffold5509: 14142-20049 Arabidopsis halleri
Araha.5509s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold5509: 14142-19141 Arabidopsis halleri
Araha.5509s0004 5.0kb downstream 5.0kb downstream 5908 true Scaffold5509: 19142-25049 Arabidopsis halleri
Araha.5509s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold5509: 20050-25049 Arabidopsis halleri
Araha.5509s0004 10.0kb upstream 10.0kb upstream 10908 true Scaffold5509: 9142-20049 Arabidopsis halleri
Araha.5509s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold5509: 9142-19141 Arabidopsis halleri
Araha.5509s0004 10.0kb downstream 10.0kb downstream 10908 true Scaffold5509: 19142-30049 Arabidopsis halleri
Araha.5509s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold5509: 20050-30049 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370739 5261 Brassicaceae View MSA
123837730 5264 Brassicales-Malvales View MSA
124338445 5266 SBM View MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain