Gene : Araha.11107s0007 A. halleri v1.1

Defline:  (1 of 1) PTHR11817:SF28 - PLASTIDIAL PYRUVATE KINASE 4, CHLOROPLASTIC Genomic Order:  7
Name:  ? Araha.11107s0007 Secondary Identifier:  ? PAC:28847108

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri ANAEROFRUCAT-PWY Arabidopsis halleri pathologic  
Ahalleri ANAGLYCOLYSIS-PWY Arabidopsis halleri pathologic  
Ahalleri PWY-1042 Arabidopsis halleri pathologic  
Ahalleri PWY-5464 Arabidopsis halleri pathologic  
Ahalleri PWY-5723 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11107s0007 0.5kb upstream 0.5kb upstream 2947 true Scaffold11107: 39848-42794 Arabidopsis halleri
Araha.11107s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold11107: 39848-40347 Arabidopsis halleri
Araha.11107s0007 0.5kb downstream 0.5kb downstream 2947 true Scaffold11107: 40348-43294 Arabidopsis halleri
Araha.11107s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold11107: 42795-43294 Arabidopsis halleri
Araha.11107s0007 1.0kb upstream 1.0kb upstream 3447 true Scaffold11107: 39348-42794 Arabidopsis halleri
Araha.11107s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold11107: 39348-40347 Arabidopsis halleri
Araha.11107s0007 1.0kb downstream 1.0kb downstream 3447 true Scaffold11107: 40348-43794 Arabidopsis halleri
Araha.11107s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold11107: 42795-43794 Arabidopsis halleri
Araha.11107s0007 2.0kb upstream 2.0kb upstream 4447 true Scaffold11107: 38348-42794 Arabidopsis halleri
Araha.11107s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold11107: 38348-40347 Arabidopsis halleri
Araha.11107s0007 2.0kb downstream 2.0kb downstream 3844 true Scaffold11107: 40348-44191 Arabidopsis halleri
Araha.11107s0007 2.0kb downstream 2.0kb downstream 1397 false Scaffold11107: 42795-44191 Arabidopsis halleri
Araha.11107s0007 5.0kb upstream 5.0kb upstream 7447 true Scaffold11107: 35348-42794 Arabidopsis halleri
Araha.11107s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold11107: 35348-40347 Arabidopsis halleri
Araha.11107s0007 5.0kb downstream 5.0kb downstream 3844 true Scaffold11107: 40348-44191 Arabidopsis halleri
Araha.11107s0007 5.0kb downstream 5.0kb downstream 1397 false Scaffold11107: 42795-44191 Arabidopsis halleri
Araha.11107s0007 10.0kb upstream 10.0kb upstream 12447 true Scaffold11107: 30348-42794 Arabidopsis halleri
Araha.11107s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold11107: 30348-40347 Arabidopsis halleri
Araha.11107s0007 10.0kb downstream 10.0kb downstream 3844 true Scaffold11107: 40348-44191 Arabidopsis halleri
Araha.11107s0007 10.0kb downstream 10.0kb downstream 1397 false Scaffold11107: 42795-44191 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364303 5261 Brassicaceae View MSA
123833815 5264 Brassicales-Malvales View MSA
124344183 5266 SBM View MSA
124244413 5268 Malvidae View MSA
124068114 5270 Rosid View MSA
123738415 5271 Pentapetalae View MSA
122787981 5272 Eudicot View MSA
122044331 5273 Angiosperm View MSA
121346943 5274 Embryophyte View MSA
123380469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain