Gene : Araha.5797s0001 A. halleri v1.1
Defline:  (1 of 1) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme Genomic Order:  1
Name:  ? Araha.5797s0001 Secondary Identifier:  ? PAC:28846525
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-5910 Arabidopsis halleri pathologic  
Ahalleri PWY-922 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5797s0001 0.5kb upstream 0.5kb upstream 3790 true Scaffold5797: 5725-9514 Arabidopsis halleri
Araha.5797s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold5797: 5725-6224 Arabidopsis halleri
Araha.5797s0001 0.5kb downstream 0.5kb downstream 3790 true Scaffold5797: 6225-10014 Arabidopsis halleri
Araha.5797s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5797: 9515-10014 Arabidopsis halleri
Araha.5797s0001 1.0kb upstream 1.0kb upstream 4290 true Scaffold5797: 5225-9514 Arabidopsis halleri
Araha.5797s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold5797: 5225-6224 Arabidopsis halleri
Araha.5797s0001 1.0kb downstream 1.0kb downstream 4290 true Scaffold5797: 6225-10514 Arabidopsis halleri
Araha.5797s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold5797: 9515-10514 Arabidopsis halleri
Araha.5797s0001 2.0kb upstream 2.0kb upstream 5290 true Scaffold5797: 4225-9514 Arabidopsis halleri
Araha.5797s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold5797: 4225-6224 Arabidopsis halleri
Araha.5797s0001 2.0kb downstream 2.0kb downstream 5290 true Scaffold5797: 6225-11514 Arabidopsis halleri
Araha.5797s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold5797: 9515-11514 Arabidopsis halleri
Araha.5797s0001 5.0kb upstream 5.0kb upstream 8290 true Scaffold5797: 1225-9514 Arabidopsis halleri
Araha.5797s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold5797: 1225-6224 Arabidopsis halleri
Araha.5797s0001 5.0kb downstream 5.0kb downstream 8290 true Scaffold5797: 6225-14514 Arabidopsis halleri
Araha.5797s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold5797: 9515-14514 Arabidopsis halleri
Araha.5797s0001 10.0kb upstream 10.0kb upstream 9514 true Scaffold5797: 1-9514 Arabidopsis halleri
Araha.5797s0001 10.0kb upstream 10.0kb upstream 6224 false Scaffold5797: 1-6224 Arabidopsis halleri
Araha.5797s0001 10.0kb downstream 10.0kb downstream 8335 true Scaffold5797: 6225-14559 Arabidopsis halleri
Araha.5797s0001 10.0kb downstream 10.0kb downstream 5045 false Scaffold5797: 9515-14559 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368774 5261 Brassicaceae View MSA
123839645 5264 Brassicales-Malvales View MSA
124341389 5266 SBM View MSA
124241910 5268 Malvidae View MSA
124060634 5270 Rosid View MSA
123746885 5271 Pentapetalae View MSA
122791824 5272 Eudicot View MSA
122042701 5273 Angiosperm View MSA
121346246 5274 Embryophyte View MSA
123424795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain